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High-quality peptide evidence for annotating non-canonical open reading frames as human proteins.
Deutsch EW, Kok LW, Mudge JM, Ruiz-Orera J, Fierro-Monti I, Sun Z, Abelin JG, Alba MM, Aspden JL, Bazzini AA, Bruford EA, Brunet MA, Calviello L, Carr SA, Carvunis AR, Chothani S, Clauwaert J, Dean K, Faridi P, Frankish A, Hubner N, Ingolia NT, Magrane M, Martin MJ, Martinez TF, Menschaert G, Ohler U, Orchard S, Rackham O, Roucou X, Slavoff SA, Valen E, Wacholder A, Weissman JS, Wu W, Xie Z, Choudhary J, Bassani-Sternberg M, Vizcaíno JA, Ternette N, Moritz RL, Prensner JR, van Heesch S. Deutsch EW, et al. Among authors: bazzini aa. bioRxiv [Preprint]. 2024 Sep 9:2024.09.09.612016. doi: 10.1101/2024.09.09.612016. bioRxiv. 2024. PMID: 39314370 Free PMC article. Preprint.
Poly(A) tails: longer is not always better.
Castellano LA, Bazzini AA. Castellano LA, et al. Among authors: bazzini aa. Nat Struct Mol Biol. 2017 Dec 7;24(12):1010-1011. doi: 10.1038/nsmb.3509. Nat Struct Mol Biol. 2017. PMID: 29215636 No abstract available.
CRISPR-Cas13d Induces Efficient mRNA Knockdown in Animal Embryos.
Kushawah G, Hernandez-Huertas L, Abugattas-Nuñez Del Prado J, Martinez-Morales JR, DeVore ML, Hassan H, Moreno-Sanchez I, Tomas-Gallardo L, Diaz-Moscoso A, Monges DE, Guelfo JR, Theune WC, Brannan EO, Wang W, Corbin TJ, Moran AM, Sánchez Alvarado A, Málaga-Trillo E, Takacs CM, Bazzini AA, Moreno-Mateos MA. Kushawah G, et al. Among authors: bazzini aa. Dev Cell. 2020 Sep 28;54(6):805-817.e7. doi: 10.1016/j.devcel.2020.07.013. Epub 2020 Aug 7. Dev Cell. 2020. PMID: 32768421 Free article.
Optimized CRISPR-RfxCas13d system for RNA targeting in zebrafish embryos.
Hernandez-Huertas L, Kushawah G, Diaz-Moscoso A, Tomas-Gallardo L, Moreno-Sanchez I, da Silva Pescador G, Bazzini AA, Moreno-Mateos MA. Hernandez-Huertas L, et al. Among authors: bazzini aa. STAR Protoc. 2021 Dec 23;3(1):101058. doi: 10.1016/j.xpro.2021.101058. eCollection 2022 Mar 18. STAR Protoc. 2021. PMID: 35005640 Free PMC article.
iCodon customizes gene expression based on the codon composition.
Diez M, Medina-Muñoz SG, Castellano LA, da Silva Pescador G, Wu Q, Bazzini AA. Diez M, et al. Among authors: bazzini aa. Sci Rep. 2022 Jul 15;12(1):12126. doi: 10.1038/s41598-022-15526-7. Sci Rep. 2022. PMID: 35840631 Free PMC article.
39 results