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Evolution of the SARS-CoV-2 proteome in three dimensions (3D) during the first six months of the COVID-19 pandemic.
Lubin JH, Zardecki C, Dolan EM, Lu C, Shen Z, Dutta S, Westbrook JD, Hudson BP, Goodsell DS, Williams JK, Voigt M, Sarma V, Xie L, Venkatachalam T, Arnold S, Alvarado LHA, Catalfano K, Khan A, McCarthy E, Staggers S, Tinsley B, Trudeau A, Singh J, Whitmore L, Zheng H, Benedek M, Currier J, Dresel M, Duvvuru A, Dyszel B, Fingar E, Hennen EM, Kirsch M, Khan AA, Labrie-Cleary C, Laporte S, Lenkeit E, Martin K, Orellana M, de la Campa MO, Paredes I, Wheeler B, Rupert A, Sam A, See K, Zapata SS, Craig PA, Hall BL, Jiang J, Koeppe JR, Mills SA, Pikaart MJ, Roberts R, Bromberg Y, Hoyer JS, Duffy S, Tischfield J, Ruiz FX, Arnold E, Baum J, Sandberg J, Brannigan G, Khare SD, Burley SK. Lubin JH, et al. Among authors: tischfield j. bioRxiv [Preprint]. 2020 Dec 7:2020.12.01.406637. doi: 10.1101/2020.12.01.406637. bioRxiv. 2020. Update in: Proteins. 2022 May;90(5):1054-1080. doi: 10.1002/prot.26250. PMID: 33299989 Free PMC article. Updated. Preprint.
Evolution of the SARS-CoV-2 proteome in three dimensions (3D) during the first 6 months of the COVID-19 pandemic.
Lubin JH, Zardecki C, Dolan EM, Lu C, Shen Z, Dutta S, Westbrook JD, Hudson BP, Goodsell DS, Williams JK, Voigt M, Sarma V, Xie L, Venkatachalam T, Arnold S, Alfaro Alvarado LH, Catalfano K, Khan A, McCarthy E, Staggers S, Tinsley B, Trudeau A, Singh J, Whitmore L, Zheng H, Benedek M, Currier J, Dresel M, Duvvuru A, Dyszel B, Fingar E, Hennen EM, Kirsch M, Khan AA, Labrie-Cleary C, Laporte S, Lenkeit E, Martin K, Orellana M, Ortiz-Alvarez de la Campa M, Paredes I, Wheeler B, Rupert A, Sam A, See K, Soto Zapata S, Craig PA, Hall BL, Jiang J, Koeppe JR, Mills SA, Pikaart MJ, Roberts R, Bromberg Y, Hoyer JS, Duffy S, Tischfield J, Ruiz FX, Arnold E, Baum J, Sandberg J, Brannigan G, Khare SD, Burley SK. Lubin JH, et al. Among authors: tischfield j. Proteins. 2022 May;90(5):1054-1080. doi: 10.1002/prot.26250. Epub 2021 Oct 9. Proteins. 2022. PMID: 34580920 Free PMC article.
Virtual Boot Camp: COVID-19 evolution and structural biology.
Burley SK, Bromberg Y, Craig P, Duffy S, Dutta S, Hall BL, Hudson BP, Jiang J, D Khare S, Koeppe JR, Lubin JH, Mills SA, Pikaart MJ, Roberts R, Sarma V, Singh J, Tischfield JA, Xie L, Zardecki C. Burley SK, et al. Among authors: tischfield ja. Biochem Mol Biol Educ. 2020 Sep;48(5):511-513. doi: 10.1002/bmb.21428. Epub 2020 Aug 14. Biochem Mol Biol Educ. 2020. PMID: 32797732 Free PMC article. No abstract available.
Prevalence of SARS-CoV-2 infection in previously undiagnosed health care workers in New Jersey, at the onset of the U.S. COVID-19 pandemic.
Barrett ES, Horton DB, Roy J, Gennaro ML, Brooks A, Tischfield J, Greenberg P, Andrews T, Jagpal S, Reilly N, Carson JL, Blaser MJ, Panettieri RA Jr. Barrett ES, et al. Among authors: tischfield j. BMC Infect Dis. 2020 Nov 16;20(1):853. doi: 10.1186/s12879-020-05587-2. BMC Infect Dis. 2020. PMID: 33198725 Free PMC article.
Detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Is Comparable in Clinical Samples Preserved in Saline or Viral Transport Medium.
Radbel J, Jagpal S, Roy J, Brooks A, Tischfield J, Sheldon M, Bixby C, Witt D, Gennaro ML, Horton DB, Barrett ES, Carson JL, Panettieri RA Jr, Blaser MJ. Radbel J, et al. Among authors: tischfield j. J Mol Diagn. 2020 Jul;22(7):871-875. doi: 10.1016/j.jmoldx.2020.04.209. Epub 2020 May 13. J Mol Diagn. 2020. PMID: 32405270 Free PMC article.
Determinants and Dynamics of SARS-CoV-2 Infection in a Diverse Population: 6-Month Evaluation of a Prospective Cohort Study.
Horton DB, Barrett ES, Roy J, Gennaro ML, Andrews T, Greenberg P, Bruiners N, Datta P, Ukey R, Velusamy SK, Fine D, Honnen WJ, Yin YS, Pinter A, Brooks A, Tischfield J, Hussain S, Jagpal S, Swaminathan S, Parmar V, Reilly N, Gaur S, Panettieri RA, Carson JL, Blaser MJ. Horton DB, et al. Among authors: tischfield j. J Infect Dis. 2021 Oct 28;224(8):1345-1356. doi: 10.1093/infdis/jiab411. J Infect Dis. 2021. PMID: 34387310 Free PMC article.
Prevalence of SARS-CoV-2 infection in previously undiagnosed health care workers at the onset of the U.S. COVID-19 epidemic.
Barrett ES, Horton DB, Roy J, Gennaro ML, Brooks A, Tischfield J, Greenberg P, Andrews T, Jagpal S, Reilly N, Blaser MJ, Carson JL, Panettieri RA Jr. Barrett ES, et al. Among authors: tischfield j. medRxiv [Preprint]. 2020 Apr 24:2020.04.20.20072470. doi: 10.1101/2020.04.20.20072470. medRxiv. 2020. Update in: BMC Infect Dis. 2020 Nov 16;20(1):853. doi: 10.1186/s12879-020-05587-2. PMID: 32511600 Free PMC article. Updated. Preprint.
De Novo Sequence and Copy Number Variants Are Strongly Associated with Tourette Disorder and Implicate Cell Polarity in Pathogenesis.
Wang S, Mandell JD, Kumar Y, Sun N, Morris MT, Arbelaez J, Nasello C, Dong S, Duhn C, Zhao X, Yang Z, Padmanabhuni SS, Yu D, King RA, Dietrich A, Khalifa N, Dahl N, Huang AY, Neale BM, Coppola G, Mathews CA, Scharf JM; Tourette International Collaborative Genetics Study (TIC Genetics); Tourette Syndrome Genetics Southern and Eastern Europe Initiative (TSGENESEE); Tourette Association of America International Consortium for Genetics (TAAICG); Fernandez TV, Buxbaum JD, De Rubeis S, Grice DE, Xing J, Heiman GA, Tischfield JA, Paschou P, Willsey AJ, State MW. Wang S, et al. Among authors: tischfield ja. Cell Rep. 2018 Sep 25;24(13):3441-3454.e12. doi: 10.1016/j.celrep.2018.08.082. Cell Rep. 2018. PMID: 30257206 Free PMC article.
Preparing DNA from cell pellets for genotyping.
Sahota A, Brooks AI, Tischfield JA. Sahota A, et al. CSH Protoc. 2007 Aug 1;2007:pdb.prot4829. doi: 10.1101/pdb.prot4829. CSH Protoc. 2007. PMID: 21357150
Preparing DNA from saliva for genotyping.
Sahota A, Brooks AI, Tischfield JA. Sahota A, et al. CSH Protoc. 2007 Aug 1;2007:pdb.prot4831. doi: 10.1101/pdb.prot4831. CSH Protoc. 2007. PMID: 21357152
339 results