Ravi A - Search Results

1

Genomic diversity of Escherichia coli isolates from backyard chickens and guinea fowl in the Gambia.

Foster-Nyarko E, Alikhan NF, Ravi A, Thomson NM, Jarju S, Kwambana-Adams BA, Secka A, O'Grady J, Antonio M, Pallen MJ. Foster-Nyarko E, et al. Among authors: ravi a. Microb Genom. 2021 Jan;7(1):mgen000484. doi: 10.1099/mgen.0.000484. Epub 2020 Nov 30. Microb Genom. 2021. PMID: 33253086 Free PMC article.

2

Loss of microbial diversity and pathogen domination of the gut microbiota in critically ill patients.

Ravi A, Halstead FD, Bamford A, Casey A, Thomson NM, van Schaik W, Snelson C, Goulden R, Foster-Nyarko E, Savva GM, Whitehouse T, Pallen MJ, Oppenheim BA. Ravi A, et al. Microb Genom. 2019 Sep;5(9):e000293. doi: 10.1099/mgen.0.000293. Epub 2019 Sep 11. Microb Genom. 2019. PMID: 31526447 Free PMC article.

3

Genomic diversity of Escherichia coli isolates from non-human primates in the Gambia.

Foster-Nyarko E, Alikhan NF, Ravi A, Thilliez G, Thomson NM, Baker D, Kay G, Cramer JD, O'Grady J, Antonio M, Pallen MJ. Foster-Nyarko E, et al. Among authors: ravi a. Microb Genom. 2020 Sep;6(9):mgen000428. doi: 10.1099/mgen.0.000428. Epub 2020 Sep 14. Microb Genom. 2020. PMID: 32924917 Free PMC article.

4

Extensive microbial diversity within the chicken gut microbiome revealed by metagenomics and culture.

Gilroy R, Ravi A, Getino M, Pursley I, Horton DL, Alikhan NF, Baker D, Gharbi K, Hall N, Watson M, Adriaenssens EM, Foster-Nyarko E, Jarju S, Secka A, Antonio M, Oren A, Chaudhuri RR, La Ragione R, Hildebrand F, Pallen MJ. Gilroy R, et al. Among authors: ravi a. PeerJ. 2021 Apr 6;9:e10941. doi: 10.7717/peerj.10941. eCollection 2021. PeerJ. 2021. PMID: 33868800 Free PMC article.

5

Metagenomic profiling of ticks: Identification of novel rickettsial genomes and detection of tick-borne canine parvovirus.

Ravi A, Ereqat S, Al-Jawabreh A, Abdeen Z, Abu Shamma O, Hall H, Pallen MJ, Nasereddin A. Ravi A, et al. PLoS Negl Trop Dis. 2019 Jan 14;13(1):e0006805. doi: 10.1371/journal.pntd.0006805. eCollection 2019 Jan. PLoS Negl Trop Dis. 2019. PMID: 30640905 Free PMC article.

6

Archaeal and Bacterial Metagenome-Assembled Genome Sequences Derived from Pig Feces.

Crossfield M, Gilroy R, Ravi A, Baker D, La Ragione RM, Pallen MJ. Crossfield M, et al. Among authors: ravi a. Microbiol Resour Announc. 2022 Jan 20;11(1):e0114221. doi: 10.1128/mra.01142-21. Epub 2022 Jan 20. Microbiol Resour Announc. 2022. PMID: 35049348 Free PMC article.

7

Hybrid metagenome assemblies link carbohydrate structure with function in the human gut microbiome.

Ravi A, Troncoso-Rey P, Ahn-Jarvis J, Corbin KR, Harris S, Harris H, Aydin A, Kay GL, Le Viet T, Gilroy R, Pallen MJ, Page AJ, O'Grady J, Warren FJ. Ravi A, et al. Commun Biol. 2022 Sep 8;5(1):932. doi: 10.1038/s42003-022-03865-0. Commun Biol. 2022. PMID: 36076058 Free PMC article.

8

Metagenomic investigation of the equine faecal microbiome reveals extensive taxonomic diversity.

Gilroy R, Leng J, Ravi A, Adriaenssens EM, Oren A, Baker D, La Ragione RM, Proudman C, Pallen MJ. Gilroy R, et al. Among authors: ravi a. PeerJ. 2022 Mar 23;10:e13084. doi: 10.7717/peerj.13084. eCollection 2022. PeerJ. 2022. PMID: 35345588 Free PMC article.

9

Whole genome sequencing of toxigenic Clostridium difficile in asymptomatic carriers: insights into possible role in transmission.

Halstead FD, Ravi A, Thomson N, Nuur M, Hughes K, Brailey M, Oppenheim BA. Halstead FD, et al. Among authors: ravi a. J Hosp Infect. 2019 Jun;102(2):125-134. doi: 10.1016/j.jhin.2018.10.012. Epub 2018 Oct 22. J Hosp Infect. 2019. PMID: 30359648

10

Exposure of Salmonella biofilms to antibiotic concentrations rapidly selects resistance with collateral tradeoffs.

Trampari E, Holden ER, Wickham GJ, Ravi A, Martins LO, Savva GM, Webber MA. Trampari E, et al. Among authors: ravi a. NPJ Biofilms Microbiomes. 2021 Jan 11;7(1):3. doi: 10.1038/s41522-020-00178-0. NPJ Biofilms Microbiomes. 2021. PMID: 33431848 Free PMC article.

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