Yang W - Search Results

1

A machine learning framework to determine geolocations from metagenomic profiling.

Huang L, Xu C, Yang W, Yu R. Huang L, et al. Among authors: yang w. Biol Direct. 2020 Nov 23;15(1):27. doi: 10.1186/s13062-020-00278-z. Biol Direct. 2020. PMID: 33225966 Free PMC article.

2

UltraStrain: An NGS-Based Ultra Sensitive Strain Typing Method for Salmonella enterica.

Yang W, Huang L, Shi C, Wang L, Yu R. Yang W, et al. Front Genet. 2019 Apr 3;10:276. doi: 10.3389/fgene.2019.00276. eCollection 2019. Front Genet. 2019. PMID: 31001322 Free PMC article.

3

ScaleQC: a scalable lossy to lossless solution for NGS data compression.

Yu R, Yang W. Yu R, et al. Among authors: yang w. Bioinformatics. 2020 Nov 1;36(17):4551-4559. doi: 10.1093/bioinformatics/btaa543. Bioinformatics. 2020. PMID: 32458976

4

Performance evaluation of lossy quality compression algorithms for RNA-seq data.

Yu R, Yang W, Wang S. Yu R, et al. Among authors: yang w. BMC Bioinformatics. 2020 Jul 20;21(1):321. doi: 10.1186/s12859-020-03658-4. BMC Bioinformatics. 2020. PMID: 32689929 Free PMC article.

5

Using deep learning to predict anti-PD-1 response in melanoma and lung cancer patients from histopathology images.

Hu J, Cui C, Yang W, Huang L, Yu R, Liu S, Kong Y. Hu J, et al. Among authors: yang w. Transl Oncol. 2021 Jan;14(1):100921. doi: 10.1016/j.tranon.2020.100921. Epub 2020 Oct 28. Transl Oncol. 2021. PMID: 33129113 Free PMC article. Review.

6

Diamond: a multi-modal DIA mass spectrometry data processing pipeline.

Li C, Gao M, Yang W, Zhong C, Yu R. Li C, et al. Among authors: yang w. Bioinformatics. 2021 Apr 19;37(2):265-267. doi: 10.1093/bioinformatics/btaa1093. Bioinformatics. 2021. PMID: 33416868

7

Ratio of the interferon-γ signature to the immunosuppression signature predicts anti-PD-1 therapy response in melanoma.

Cui C, Xu C, Yang W, Chi Z, Sheng X, Si L, Xie Y, Yu J, Wang S, Yu R, Guo J, Kong Y. Cui C, et al. Among authors: yang w. NPJ Genom Med. 2021 Feb 4;6(1):7. doi: 10.1038/s41525-021-00169-w. NPJ Genom Med. 2021. PMID: 33542239 Free PMC article.

8

Snipe: highly sensitive pathogen detection from metagenomic sequencing data.

Huang L, Hong B, Yang W, Wang L, Yu R. Huang L, et al. Among authors: yang w. Brief Bioinform. 2021 Sep 2;22(5):bbab064. doi: 10.1093/bib/bbab064. Brief Bioinform. 2021. PMID: 33822895

9

Comparison of high-throughput single-cell RNA sequencing data processing pipelines.

Gao M, Ling M, Tang X, Wang S, Xiao X, Qiao Y, Yang W, Yu R. Gao M, et al. Among authors: yang w. Brief Bioinform. 2021 May 20;22(3):bbaa116. doi: 10.1093/bib/bbaa116. Brief Bioinform. 2021. PMID: 34020539

10

Inconsistent prediction capability of ImmuneCells.Sig across different RNA-seq datasets.

Xiao X, Xu C, Yang W, Yu R. Xiao X, et al. Among authors: yang w. Nat Commun. 2021 Jul 7;12(1):4167. doi: 10.1038/s41467-021-24303-5. Nat Commun. 2021. PMID: 34234113 Free PMC article. No abstract available.

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