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Page 1
Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms.
Gordon DE, Hiatt J, Bouhaddou M, Rezelj VV, Ulferts S, Braberg H, Jureka AS, Obernier K, Guo JZ, Batra J, Kaake RM, Weckstein AR, Owens TW, Gupta M, Pourmal S, Titus EW, Cakir M, Soucheray M, McGregor M, Cakir Z, Jang G, O'Meara MJ, Tummino TA, Zhang Z, Foussard H, Rojc A, Zhou Y, Kuchenov D, Hüttenhain R, Xu J, Eckhardt M, Swaney DL, Fabius JM, Ummadi M, Tutuncuoglu B, Rathore U, Modak M, Haas P, Haas KM, Naing ZZC, Pulido EH, Shi Y, Barrio-Hernandez I, Memon D, Petsalaki E, Dunham A, Marrero MC, Burke D, Koh C, Vallet T, Silvas JA, Azumaya CM, Billesbølle C, Brilot AF, Campbell MG, Diallo A, Dickinson MS, Diwanji D, Herrera N, Hoppe N, Kratochvil HT, Liu Y, Merz GE, Moritz M, Nguyen HC, Nowotny C, Puchades C, Rizo AN, Schulze-Gahmen U, Smith AM, Sun M, Young ID, Zhao J, Asarnow D, Biel J, Bowen A, Braxton JR, Chen J, Chio CM, Chio US, Deshpande I, Doan L, Faust B, Flores S, Jin M, Kim K, Lam VL, Li F, Li J, Li YL, Li Y, Liu X, Lo M, Lopez KE, Melo AA, Moss FR 3rd, Nguyen P, Paulino J, Pawar KI, Peters JK, Pospiech TH Jr, Safari M, Sangwan S, Schaefer K, Thomas PV, Thwin AC, Trenker R, Tse E, Tsui TKM, Wang F, Whitis N, Yu Z, Zhang K, Zhang Y, Zhou F, Saltzberg D; QCRG Str… See abstract for full author list ➔ Gordon DE, et al. Among authors: asarnow d. Science. 2020 Dec 4;370(6521):eabe9403. doi: 10.1126/science.abe9403. Epub 2020 Oct 15. Science. 2020. PMID: 33060197 Free PMC article.
Recent advances in infectious disease research using cryo-electron tomography.
Asarnow D, Becker VA, Bobe D, Dubbledam C, Johnston JD, Kopylov M, Lavoie NR, Li Q, Mattingly JM, Mendez JH, Paraan M, Turner J, Upadhye V, Walsh RM Jr, Gupta M, Eng ET. Asarnow D, et al. Front Mol Biosci. 2024 Jan 15;10:1296941. doi: 10.3389/fmolb.2023.1296941. eCollection 2023. Front Mol Biosci. 2024. PMID: 38288336 Free PMC article. Review.
Full-spike deep mutational scanning helps predict the evolutionary success of SARS-CoV-2 clades.
Dadonaite B, Brown J, McMahon TE, Farrell AG, Asarnow D, Stewart C, Logue J, Murrell B, Chu HY, Veesler D, Bloom JD. Dadonaite B, et al. Among authors: asarnow d. bioRxiv [Preprint]. 2023 Nov 14:2023.11.13.566961. doi: 10.1101/2023.11.13.566961. bioRxiv. 2023. Update in: Nature. 2024 Jul;631(8021):617-626. doi: 10.1038/s41586-024-07636-1. PMID: 38014024 Free PMC article. Updated. Preprint.
Spike deep mutational scanning helps predict success of SARS-CoV-2 clades.
Dadonaite B, Brown J, McMahon TE, Farrell AG, Figgins MD, Asarnow D, Stewart C, Lee J, Logue J, Bedford T, Murrell B, Chu HY, Veesler D, Bloom JD. Dadonaite B, et al. Among authors: asarnow d. Nature. 2024 Jul;631(8021):617-626. doi: 10.1038/s41586-024-07636-1. Epub 2024 Jul 3. Nature. 2024. PMID: 38961298 Free PMC article.
Isolation and escape mapping of broadly neutralizing antibodies against emerging delta-coronaviruses.
Rexhepaj M, Asarnow D, Perruzza L, Park YJ, Guarino B, Mccallum M, Culap K, Saliba C, Leoni G, Balmelli A, Yoshiyama CN, Dickinson MS, Quispe J, Brown JT, Tortorici MA, Sprouse KR, Taylor AL, Corti D, Starr TN, Benigni F, Veesler D. Rexhepaj M, et al. Among authors: asarnow d. Immunity. 2024 Oct 30:S1074-7613(24)00481-3. doi: 10.1016/j.immuni.2024.10.001. Online ahead of print. Immunity. 2024. PMID: 39488210 Free article.
A pan-variant miniprotein inhibitor protects against SARS-CoV-2 variants.
Lee J, Case JB, Park YJ, Ravichandran R, Asarnow D, Tortorici MA, Brown JT, Sanapala S, Carter L, Baker D, Diamond MS, Veesler D. Lee J, et al. Among authors: asarnow d. bioRxiv [Preprint]. 2024 Aug 10:2024.08.08.606885. doi: 10.1101/2024.08.08.606885. bioRxiv. 2024. PMID: 39149384 Free PMC article. Preprint.
A systematic search for RNA structural switches across the human transcriptome.
Khoroshkin M, Asarnow D, Zhou S, Navickas A, Winters A, Goudreau J, Zhou SK, Yu J, Palka C, Fish L, Borah A, Yousefi K, Carpenter C, Ansel KM, Cheng Y, Gilbert LA, Goodarzi H. Khoroshkin M, et al. Among authors: asarnow d. Nat Methods. 2024 Sep;21(9):1634-1645. doi: 10.1038/s41592-024-02335-1. Epub 2024 Jul 16. Nat Methods. 2024. PMID: 39014073 Free PMC article.
Broadly neutralizing antibodies against emerging delta-coronaviruses.
Rexhepaj M, Park YJ, Perruzza L, Asarnow D, Mccallum M, Culap K, Saliba C, Leoni G, Balmelli A, Yoshiyama CN, Dickinson MS, Quispe J, Brown JT, Tortorici MA, Sprouse KR, Taylor AL, Starr TN, Corti D, Benigni F, Veesler D. Rexhepaj M, et al. Among authors: asarnow d. bioRxiv [Preprint]. 2024 Apr 1:2024.03.27.586411. doi: 10.1101/2024.03.27.586411. bioRxiv. 2024. Update in: Immunity. 2024 Oct 30:S1074-7613(24)00481-3. doi: 10.1016/j.immuni.2024.10.001. PMID: 38617231 Free PMC article. Updated. Preprint.
A broadly generalizable stabilization strategy for sarbecovirus fusion machinery vaccines.
Lee J, Stewart C, Schaefer A, Leaf EM, Park YJ, Asarnow D, Powers JM, Treichel C, Corti D, Baric R, King NP, Veesler D. Lee J, et al. Among authors: asarnow d. bioRxiv [Preprint]. 2023 Dec 20:2023.12.12.571160. doi: 10.1101/2023.12.12.571160. bioRxiv. 2023. Update in: Nat Commun. 2024 Jun 28;15(1):5496. doi: 10.1038/s41467-024-49656-5. PMID: 38168207 Free PMC article. Updated. Preprint.
41 results