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Single-Cell RNA Sequencing Analysis Reveals a Crucial Role for CTHRC1 (Collagen Triple Helix Repeat Containing 1) Cardiac Fibroblasts After Myocardial Infarction.
Ruiz-Villalba A, Romero JP, Hernández SC, Vilas-Zornoza A, Fortelny N, Castro-Labrador L, San Martin-Uriz P, Lorenzo-Vivas E, García-Olloqui P, Palacio M, Gavira JJ, Bastarrika G, Janssens S, Wu M, Iglesias E, Abizanda G, de Morentin XM, Lasaga M, Planell N, Bock C, Alignani D, Medal G, Prudovsky I, Jin YR, Ryzhov S, Yin H, Pelacho B, Gomez-Cabrero D, Lindner V, Lara-Astiaso D, Prósper F. Ruiz-Villalba A, et al. Circulation. 2020 Nov 10;142(19):1831-1847. doi: 10.1161/CIRCULATIONAHA.119.044557. Epub 2020 Sep 25. Circulation. 2020. PMID: 32972203 Free PMC article.
Understanding the Adult Mammalian Heart at Single-Cell RNA-Seq Resolution.
Marín-Sedeño E, de Morentin XM, Pérez-Pomares JM, Gómez-Cabrero D, Ruiz-Villalba A. Marín-Sedeño E, et al. Front Cell Dev Biol. 2021 May 12;9:645276. doi: 10.3389/fcell.2021.645276. eCollection 2021. Front Cell Dev Biol. 2021. PMID: 34055776 Free PMC article. Review.
Deconvolution of the hematopoietic stem cell microenvironment reveals a high degree of specialization and conservation.
Ye J, Calvo IA, Cenzano I, Vilas A, Martinez-de-Morentin X, Lasaga M, Alignani D, Paiva B, Viñado AC, San Martin-Uriz P, Romero JP, Quilez Agreda D, Miñana Barrios M, Sancho-González I, Todisco G, Malcovati L, Planell N, Saez B, Tegner JN, Prosper F, Gomez-Cabrero D. Ye J, et al. iScience. 2022 Apr 8;25(5):104225. doi: 10.1016/j.isci.2022.104225. eCollection 2022 May 20. iScience. 2022. PMID: 35494238 Free PMC article.
Functional and transcriptomic analysis of extracellular vesicles identifies calprotectin as a new prognostic marker in peripheral arterial disease (PAD).
Saenz-Pipaon G, San Martín P, Planell N, Maillo A, Ravassa S, Vilas-Zornoza A, Martinez-Aguilar E, Rodriguez JA, Alameda D, Lara-Astiaso D, Prosper F, Paramo JA, Orbe J, Gomez-Cabrero D, Roncal C. Saenz-Pipaon G, et al. J Extracell Vesicles. 2020 Feb 19;9(1):1729646. doi: 10.1080/20013078.2020.1729646. eCollection 2020. J Extracell Vesicles. 2020. PMID: 32158521 Free PMC article.
STATegra: Multi-Omics Data Integration - A Conceptual Scheme With a Bioinformatics Pipeline.
Planell N, Lagani V, Sebastian-Leon P, van der Kloet F, Ewing E, Karathanasis N, Urdangarin A, Arozarena I, Jagodic M, Tsamardinos I, Tarazona S, Conesa A, Tegner J, Gomez-Cabrero D. Planell N, et al. Front Genet. 2021 Mar 4;12:620453. doi: 10.3389/fgene.2021.620453. eCollection 2021. Front Genet. 2021. PMID: 33747045 Free PMC article.
Non-parametric combination analysis of multiple data types enables detection of novel regulatory mechanisms in T cells of multiple sclerosis patients.
Fernandes SJ, Morikawa H, Ewing E, Ruhrmann S, Joshi RN, Lagani V, Karathanasis N, Khademi M, Planell N, Schmidt A, Tsamardinos I, Olsson T, Piehl F, Kockum I, Jagodic M, Tegnér J, Gomez-Cabrero D. Fernandes SJ, et al. Sci Rep. 2019 Aug 19;9(1):11996. doi: 10.1038/s41598-019-48493-7. Sci Rep. 2019. PMID: 31427643 Free PMC article.
Targeted lipidomics reveals extensive changes in circulating lipid mediators in patients with acutely decompensated cirrhosis.
López-Vicario C, Checa A, Urdangarin A, Aguilar F, Alcaraz-Quiles J, Caraceni P, Amorós A, Pavesi M, Gómez-Cabrero D, Trebicka J, Oettl K, Moreau R, Planell N, Arroyo V, Wheelock CE, Clària J. López-Vicario C, et al. J Hepatol. 2020 Oct;73(4):817-828. doi: 10.1016/j.jhep.2020.03.046. Epub 2020 Apr 12. J Hepatol. 2020. PMID: 32294533
116 results