Agapova YK - Search Results

1

Structure-based inhibitors targeting the alpha-helical domain of the Spiroplasma melliferum histone-like HU protein.

Agapova YK, Altukhov DA, Timofeev VI, Stroylov VS, Mityanov VS, Korzhenevskiy DA, Vlaskina AV, Smirnova EV, Bocharov EV, Rakitina TV. Agapova YK, et al. Sci Rep. 2020 Sep 15;10(1):15128. doi: 10.1038/s41598-020-72113-4. Sci Rep. 2020. PMID: 32934267 Free PMC article.

2

Structural basis of the high thermal stability of the histone-like HU protein from the mollicute Spiroplasma melliferum KC3.

Boyko KM, Rakitina TV, Korzhenevskiy DA, Vlaskina AV, Agapova YK, Kamashev DE, Kleymenov SY, Popov VO. Boyko KM, et al. Among authors: agapova yk. Sci Rep. 2016 Nov 3;6:36366. doi: 10.1038/srep36366. Sci Rep. 2016. PMID: 27808161 Free PMC article.

3

LSSmScarlet, dCyRFP2s, dCyOFP2s and CRISPRed2s, Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift.

Subach OM, Vlaskina AV, Agapova YK, Dorovatovskii PV, Nikolaeva AY, Ivashkina OI, Popov VO, Piatkevich KD, Khrenova MG, Smirnova TA, Boyko KM, Subach FV. Subach OM, et al. Among authors: agapova yk. Int J Mol Sci. 2021 Nov 28;22(23):12887. doi: 10.3390/ijms222312887. Int J Mol Sci. 2021. PMID: 34884694 Free PMC article.

4

YTnC2, an improved genetically encoded green calcium indicator based on toadfish troponin C.

Subach OM, Vlaskina AV, Agapova YK, Nikolaeva AY, Varizhuk AM, Podgorny OV, Piatkevich KD, Patrushev MV, Boyko KM, Subach FV. Subach OM, et al. Among authors: agapova yk. FEBS Open Bio. 2023 Nov;13(11):2047-2060. doi: 10.1002/2211-5463.13702. Epub 2023 Sep 20. FEBS Open Bio. 2023. PMID: 37650870 Free PMC article.

5

FNCaMP, ratiometric green calcium indicator based on mNeonGreen protein.

Subach OM, Varfolomeeva L, Vlaskina AV, Agapova YK, Nikolaeva AY, Piatkevich KD, Patrushev MV, Boyko KM, Subach FV. Subach OM, et al. Among authors: agapova yk. Biochem Biophys Res Commun. 2023 Jul 12;665:169-177. doi: 10.1016/j.bbrc.2023.04.108. Epub 2023 Apr 28. Biochem Biophys Res Commun. 2023. PMID: 37163937

6

Blue-to-Red TagFT, mTagFT, mTsFT, and Green-to-FarRed mNeptusFT2 Proteins, Genetically Encoded True and Tandem Fluorescent Timers.

Subach OM, Vlaskina AV, Agapova YK, Nikolaeva AY, Anokhin KV, Piatkevich KD, Patrushev MV, Boyko KM, Subach FV. Subach OM, et al. Among authors: agapova yk. Int J Mol Sci. 2023 Feb 7;24(4):3279. doi: 10.3390/ijms24043279. Int J Mol Sci. 2023. PMID: 36834686 Free PMC article.

7

cNTnC and fYTnC2, Genetically Encoded Green Calcium Indicators Based on Troponin C from Fast Animals.

Subach OM, Vlaskina AV, Agapova YK, Korzhenevskiy DA, Nikolaeva AY, Varizhuk AM, Subach MF, Patrushev MV, Piatkevich KD, Boyko KM, Subach FV. Subach OM, et al. Among authors: agapova yk. Int J Mol Sci. 2022 Nov 23;23(23):14614. doi: 10.3390/ijms232314614. Int J Mol Sci. 2022. PMID: 36498942 Free PMC article.

8

LSSmScarlet2 and LSSmScarlet3, Chemically Stable Genetically Encoded Red Fluorescent Proteins with a Large Stokes' Shift.

Subach OM, Vlaskina AV, Agapova YK, Piatkevich KD, Patrushev MV, Samygina VR, Subach FV. Subach OM, et al. Among authors: agapova yk. Int J Mol Sci. 2022 Sep 21;23(19):11051. doi: 10.3390/ijms231911051. Int J Mol Sci. 2022. PMID: 36232354 Free PMC article.

9

Two independent routes of post-translational chemistry in fluorescent protein FusionRed.

Muslinkina L, Pletnev VZ, Pletneva NV, Ruchkin DA, Kolesov DV, Bogdanov AM, Kost LA, Rakitina TV, Agapova YK, Shemyakina II, Chudakov DM, Pletnev S. Muslinkina L, et al. Among authors: agapova yk. Int J Biol Macromol. 2020 Jul 15;155:551-559. doi: 10.1016/j.ijbiomac.2020.03.244. Epub 2020 Mar 31. Int J Biol Macromol. 2020. PMID: 32243936

10

Structural plasticity and thermal stability of the histone-like protein from Spiroplasma melliferum are due to phenylalanine insertions into the conservative scaffold.

Timofeev VI, Altukhov DA, Talyzina AA, Agapova YK, Vlaskina AV, Korzhenevskiy DA, Kleymenov SY, Bocharov EV, Rakitina TV. Timofeev VI, et al. Among authors: agapova yk. J Biomol Struct Dyn. 2018 Dec;36(16):4392-4404. doi: 10.1080/07391102.2017.1417162. Epub 2018 Jan 7. J Biomol Struct Dyn. 2018. PMID: 29283021

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