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Page 1
Single-cell metabolic profiling of human cytotoxic T cells.
Hartmann FJ, Mrdjen D, McCaffrey E, Glass DR, Greenwald NF, Bharadwaj A, Khair Z, Verberk SGS, Baranski A, Baskar R, Graf W, Van Valen D, Van den Bossche J, Angelo M, Bendall SC. Hartmann FJ, et al. Among authors: graf w. Nat Biotechnol. 2021 Feb;39(2):186-197. doi: 10.1038/s41587-020-0651-8. Epub 2020 Aug 31. Nat Biotechnol. 2021. PMID: 32868913 Free PMC article.
Deep learning for cellular image analysis.
Moen E, Bannon D, Kudo T, Graf W, Covert M, Van Valen D. Moen E, et al. Among authors: graf w. Nat Methods. 2019 Dec;16(12):1233-1246. doi: 10.1038/s41592-019-0403-1. Epub 2019 May 27. Nat Methods. 2019. PMID: 31133758 Free PMC article. Review.
Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning.
Greenwald NF, Miller G, Moen E, Kong A, Kagel A, Dougherty T, Fullaway CC, McIntosh BJ, Leow KX, Schwartz MS, Pavelchek C, Cui S, Camplisson I, Bar-Tal O, Singh J, Fong M, Chaudhry G, Abraham Z, Moseley J, Warshawsky S, Soon E, Greenbaum S, Risom T, Hollmann T, Bendall SC, Keren L, Graf W, Angelo M, Van Valen D. Greenwald NF, et al. Among authors: graf w. Nat Biotechnol. 2022 Apr;40(4):555-565. doi: 10.1038/s41587-021-01094-0. Epub 2021 Nov 18. Nat Biotechnol. 2022. PMID: 34795433 Free PMC article.
The immunoregulatory landscape of human tuberculosis granulomas.
McCaffrey EF, Donato M, Keren L, Chen Z, Delmastro A, Fitzpatrick MB, Gupta S, Greenwald NF, Baranski A, Graf W, Kumar R, Bosse M, Fullaway CC, Ramdial PK, Forgó E, Jojic V, Van Valen D, Mehra S, Khader SA, Bendall SC, van de Rijn M, Kalman D, Kaushal D, Hunter RL, Banaei N, Steyn AJC, Khatri P, Angelo M. McCaffrey EF, et al. Among authors: graf w. Nat Immunol. 2022 Feb;23(2):318-329. doi: 10.1038/s41590-021-01121-x. Epub 2022 Jan 20. Nat Immunol. 2022. PMID: 35058616 Free PMC article.
Author Correction: The immunoregulatory landscape of human tuberculosis granulomas.
McCaffrey EF, Donato M, Keren L, Chen Z, Delmastro A, Fitzpatrick MB, Gupta S, Greenwald NF, Baranski A, Graf W, Kumar R, Bosse M, Fullaway CC, Ramdial PK, Forgó E, Jojic V, Van Valen D, Mehra S, Khader SA, Bendall SC, van de Rijn M, Kalman D, Kaushal D, Hunter RL, Banaei N, Steyn AJC, Khatri P, Angelo M. McCaffrey EF, et al. Among authors: graf w. Nat Immunol. 2022 May;23(5):814. doi: 10.1038/s41590-022-01178-2. Nat Immunol. 2022. PMID: 35277696 Free PMC article. No abstract available.
A spatially resolved timeline of the human maternal-fetal interface.
Greenbaum S, Averbukh I, Soon E, Rizzuto G, Baranski A, Greenwald NF, Kagel A, Bosse M, Jaswa EG, Khair Z, Kwok S, Warshawsky S, Piyadasa H, Goldston M, Spence A, Miller G, Schwartz M, Graf W, Van Valen D, Winn VD, Hollmann T, Keren L, van de Rijn M, Angelo M. Greenbaum S, et al. Among authors: graf w. Nature. 2023 Jul;619(7970):595-605. doi: 10.1038/s41586-023-06298-9. Epub 2023 Jul 19. Nature. 2023. PMID: 37468587 Free PMC article.
Accurate single-molecule spot detection for image-based spatial transcriptomics with weakly supervised deep learning.
Laubscher E, Wang XJ, Razin N, Dougherty T, Xu RJ, Ombelets L, Pao E, Graf W, Moffitt JR, Yue Y, Van Valen D. Laubscher E, et al. Among authors: graf w. bioRxiv [Preprint]. 2024 Feb 5:2023.09.03.556122. doi: 10.1101/2023.09.03.556122. bioRxiv. 2024. Update in: Cell Syst. 2024 May 15;15(5):475-482.e6. doi: 10.1016/j.cels.2024.04.006. PMID: 37732188 Free PMC article. Updated. Preprint.
573 results