Xu Z - Search Results

1

A genome-wide study of DNA methylation in white blood cells and asthma in Latino children and youth.

Jiang Y, Forno E, Han YY, Xu Z, Hu D, Boutaoui N, Eng C, Acosta-Pérez E, Huntsman S, Colón-Semidey A, Keys KL, Rodríguez-Santana JR, Alvarez M, Pino-Yanes M, Canino G, Chen W, Burchard EG, Celedón JC. Jiang Y, et al. Among authors: xu z. Epigenetics. 2021 May;16(5):577-585. doi: 10.1080/15592294.2020.1809872. Epub 2020 Aug 31. Epigenetics. 2021. PMID: 32799603 Free PMC article.

2

BREM-SC: a bayesian random effects mixture model for joint clustering single cell multi-omics data.

Wang X, Sun Z, Zhang Y, Xu Z, Xin H, Huang H, Duerr RH, Chen K, Ding Y, Chen W. Wang X, et al. Among authors: xu z. Nucleic Acids Res. 2020 Jun 19;48(11):5814-5824. doi: 10.1093/nar/gkaa314. Nucleic Acids Res. 2020. PMID: 32379315 Free PMC article.

3

Expression Quantitative Trait Methylation Analysis Reveals Methylomic Associations With Gene Expression in Childhood Asthma.

Kim S, Forno E, Zhang R, Park HJ, Xu Z, Yan Q, Boutaoui N, Acosta-Pérez E, Canino G, Chen W, Celedón JC. Kim S, et al. Among authors: xu z. Chest. 2020 Nov;158(5):1841-1856. doi: 10.1016/j.chest.2020.05.601. Epub 2020 Jun 20. Chest. 2020. PMID: 32569636 Free PMC article.

4

Differential gene expression in nasal airway epithelium from overweight or obese youth with asthma.

Xu Z, Forno E, Acosta-Pérez E, Han YY, Rosser F, Manni ML, Canino G, Chen W, Celedón JC. Xu Z, et al. Pediatr Allergy Immunol. 2022 Apr;33(4):e13776. doi: 10.1111/pai.13776. Pediatr Allergy Immunol. 2022. PMID: 35470932 Free PMC article.

5

Comprehensive benchmarking of CITE-seq versus DOGMA-seq single cell multimodal omics.

Xu Z, Heidrich-O'Hare E, Chen W, Duerr RH. Xu Z, et al. Genome Biol. 2022 Jun 23;23(1):135. doi: 10.1186/s13059-022-02698-8. Genome Biol. 2022. PMID: 35739535 Free PMC article.

6

Integrative analysis of spatial transcriptome with single-cell transcriptome and single-cell epigenome in mouse lungs after immunization.

Xu Z, Wang X, Fan L, Wang F, Lin B, Wang J, Trevejo-Nuñez G, Chen W, Chen K. Xu Z, et al. iScience. 2022 Aug 9;25(9):104900. doi: 10.1016/j.isci.2022.104900. eCollection 2022 Sep 16. iScience. 2022. PMID: 36039299 Free PMC article.

7

Nasal DNA methylation at three CpG sites predicts childhood allergic disease.

van Breugel M, Qi C, Xu Z, Pedersen CT, Petoukhov I, Vonk JM, Gehring U, Berg M, Bügel M, Carpaij OA, Forno E, Morin A, Eliasen AU, Jiang Y, van den Berge M, Nawijn MC, Li Y, Chen W, Bont LJ, Bønnelykke K, Celedón JC, Koppelman GH, Xu CJ. van Breugel M, et al. Among authors: xu cj, xu z. Nat Commun. 2022 Dec 1;13(1):7415. doi: 10.1038/s41467-022-35088-6. Nat Commun. 2022. PMID: 36456559 Free PMC article.

8

Cis- and trans-eQTM analysis reveals novel epigenetic and transcriptomic immune markers of atopic asthma in airway epithelium.

Kim S, Xu Z, Forno E, Qin Y, Park HJ, Yue M, Yan Q, Manni ML, Acosta-Pérez E, Canino G, Chen W, Celedón JC. Kim S, et al. Among authors: xu z. J Allergy Clin Immunol. 2023 Oct;152(4):887-898. doi: 10.1016/j.jaci.2023.05.018. Epub 2023 Jun 2. J Allergy Clin Immunol. 2023. PMID: 37271320 Free PMC article.

9

Nasal epithelial gene expression and total IgE in children and adolescents with asthma.

Xu Z, Forno E, Sun Y, Manni ML, Han YY, Kim S, Yue M, Vonk JM, Kersten ETM, Acosta-Perez E, Canino G, Koppelman GH, Chen W, Celedón JC. Xu Z, et al. J Allergy Clin Immunol. 2024 Jan;153(1):122-131. doi: 10.1016/j.jaci.2023.09.014. Epub 2023 Sep 22. J Allergy Clin Immunol. 2024. PMID: 37742934

10

Methyl-TWAS: A powerful method for in silico transcriptome-wide association studies (TWAS) using long-range DNA methylation.

Kim S, Qin Y, Park HJ, Yue M, Xu Z, Forno E, Chen W, Celedón JC. Kim S, et al. Among authors: xu z. bioRxiv [Preprint]. 2023 Nov 15:2023.11.10.566586. doi: 10.1101/2023.11.10.566586. bioRxiv. 2023. PMID: 38014125 Free PMC article. Preprint.

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