Wade JT - Search Results

1

Redefining fundamental concepts of transcription initiation in bacteria.

Mejía-Almonte C, Busby SJW, Wade JT, van Helden J, Arkin AP, Stormo GD, Eilbeck K, Palsson BO, Galagan JE, Collado-Vides J. Mejía-Almonte C, et al. Among authors: wade jt. Nat Rev Genet. 2020 Nov;21(11):699-714. doi: 10.1038/s41576-020-0254-8. Epub 2020 Jul 14. Nat Rev Genet. 2020. PMID: 32665585 Free PMC article. Review.

2

Transcription activation at the Escherichia coli melAB promoter: the role of MelR and the cyclic AMP receptor protein.

Belyaeva TA, Wade JT, Webster CL, Howard VJ, Thomas MS, Hyde EI, Busby SJ. Belyaeva TA, et al. Among authors: wade jt. Mol Microbiol. 2000 Apr;36(1):211-22. doi: 10.1046/j.1365-2958.2000.01849.x. Mol Microbiol. 2000. PMID: 10760178 Free article.

3

Repression of the Escherichia coli melR promoter by MelR: evidence that efficient repression requires the formation of a repression loop.

Wade JT, Belyaeva TA, Hyde EI, Busby SJ. Wade JT, et al. Mol Microbiol. 2000 Apr;36(1):223-9. doi: 10.1046/j.1365-2958.2000.01850.x. Mol Microbiol. 2000. PMID: 10760179 Free article.

4

A simple mechanism for co-dependence on two activators at an Escherichia coli promoter.

Wade JT, Belyaeva TA, Hyde EI, Busby SJ. Wade JT, et al. EMBO J. 2001 Dec 17;20(24):7160-7. doi: 10.1093/emboj/20.24.7160. EMBO J. 2001. PMID: 11742992 Free PMC article.

5

Genomic studies with Escherichia coli MelR protein: applications of chromatin immunoprecipitation and microarrays.

Grainger DC, Overton TW, Reppas N, Wade JT, Tamai E, Hobman JL, Constantinidou C, Struhl K, Church G, Busby SJ. Grainger DC, et al. Among authors: wade jt. J Bacteriol. 2004 Oct;186(20):6938-43. doi: 10.1128/JB.186.20.6938-6943.2004. J Bacteriol. 2004. PMID: 15466047 Free PMC article.

6

Extensive functional overlap between sigma factors in Escherichia coli.

Wade JT, Castro Roa D, Grainger DC, Hurd D, Busby SJ, Struhl K, Nudler E. Wade JT, et al. Nat Struct Mol Biol. 2006 Sep;13(9):806-14. doi: 10.1038/nsmb1130. Epub 2006 Aug 6. Nat Struct Mol Biol. 2006. PMID: 16892065

7

Genomic analysis of protein-DNA interactions in bacteria: insights into transcription and chromosome organization.

Wade JT, Struhl K, Busby SJ, Grainger DC. Wade JT, et al. Mol Microbiol. 2007 Jul;65(1):21-6. doi: 10.1111/j.1365-2958.2007.05781.x. Mol Microbiol. 2007. PMID: 17581117 Free article. Review.

8

The transition from transcriptional initiation to elongation.

Wade JT, Struhl K. Wade JT, et al. Curr Opin Genet Dev. 2008 Apr;18(2):130-6. doi: 10.1016/j.gde.2007.12.008. Epub 2008 Feb 20. Curr Opin Genet Dev. 2008. PMID: 18282700 Free PMC article. Review.

9

Pervasive transcription: illuminating the dark matter of bacterial transcriptomes.

Wade JT, Grainger DC. Wade JT, et al. Nat Rev Microbiol. 2014 Sep;12(9):647-53. doi: 10.1038/nrmicro3316. Epub 2014 Jul 28. Nat Rev Microbiol. 2014. PMID: 25069631 Review.

10

Where to begin? Mapping transcription start sites genome-wide in Escherichia coli.

Wade JT. Wade JT. J Bacteriol. 2015 Jan 1;197(1):4-6. doi: 10.1128/JB.02410-14. Epub 2014 Oct 20. J Bacteriol. 2015. PMID: 25331438 Free PMC article.

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