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Page 1
Introductions and early spread of SARS-CoV-2 in the New York City area.
Gonzalez-Reiche AS, Hernandez MM, Sullivan MJ, Ciferri B, Alshammary H, Obla A, Fabre S, Kleiner G, Polanco J, Khan Z, Alburquerque B, van de Guchte A, Dutta J, Francoeur N, Melo BS, Oussenko I, Deikus G, Soto J, Sridhar SH, Wang YC, Twyman K, Kasarskis A, Altman DR, Smith M, Sebra R, Aberg J, Krammer F, García-Sastre A, Luksza M, Patel G, Paniz-Mondolfi A, Gitman M, Sordillo EM, Simon V, van Bakel H. Gonzalez-Reiche AS, et al. Among authors: oussenko i. Science. 2020 Jul 17;369(6501):297-301. doi: 10.1126/science.abc1917. Epub 2020 May 29. Science. 2020. PMID: 32471856 Free PMC article.
Blurred Molecular Epidemiological Lines Between the Two Dominant Methicillin-Resistant Staphylococcus aureus Clones.
Dupper AC, Sullivan MJ, Chacko KI, Mishkin A, Ciferri B, Kumaresh A, Berbel Caban A, Oussenko I, Beckford C, Zeitouni NE, Sebra R, Hamula C, Smith M, Kasarskis A, Patel G, McBride RB, van Bakel H, Altman DR. Dupper AC, et al. Among authors: oussenko i. Open Forum Infect Dis. 2019 Jun 27;6(9):ofz302. doi: 10.1093/ofid/ofz302. eCollection 2019 Sep. Open Forum Infect Dis. 2019. PMID: 31660395 Free PMC article.
PathoSPOT genomic epidemiology reveals under-the-radar nosocomial outbreaks.
Berbel Caban A, Pak TR, Obla A, Dupper AC, Chacko KI, Fox L, Mills A, Ciferri B, Oussenko I, Beckford C, Chung M, Sebra R, Smith M, Conolly S, Patel G, Kasarskis A, Sullivan MJ, Altman DR, van Bakel H. Berbel Caban A, et al. Among authors: oussenko i. Genome Med. 2020 Nov 16;12(1):96. doi: 10.1186/s13073-020-00798-3. Genome Med. 2020. PMID: 33198787 Free PMC article.
Everybody nose: molecular and clinical characteristics of nasal colonization during active methicillin-resistant Staphylococcus aureus bloodstream infection.
Reategui Schwarz E, van de Guchte A, Dupper AC, Caban AB, Nadkarni D, Fox L, Mills A, Obla A, Chacko KI, Oussenko I, Samaroo F, Polanco J, Silvera R, Smith ML, Patel G, Gitman M, Alburquerque B, Chung M, Sullivan MJ, van Bakel H, Altman DR. Reategui Schwarz E, et al. Among authors: oussenko i. BMC Infect Dis. 2022 Apr 24;22(1):400. doi: 10.1186/s12879-022-07371-w. BMC Infect Dis. 2022. PMID: 35462538 Free PMC article.
Epigenomic characterization of Clostridioides difficile finds a conserved DNA methyltransferase that mediates sporulation and pathogenesis.
Oliveira PH, Ribis JW, Garrett EM, Trzilova D, Kim A, Sekulovic O, Mead EA, Pak T, Zhu S, Deikus G, Touchon M, Lewis-Sandari M, Beckford C, Zeitouni NE, Altman DR, Webster E, Oussenko I, Bunyavanich S, Aggarwal AK, Bashir A, Patel G, Wallach F, Hamula C, Huprikar S, Schadt EE, Sebra R, van Bakel H, Kasarskis A, Tamayo R, Shen A, Fang G. Oliveira PH, et al. Among authors: oussenko i. Nat Microbiol. 2020 Jan;5(1):166-180. doi: 10.1038/s41564-019-0613-4. Epub 2019 Nov 25. Nat Microbiol. 2020. PMID: 31768029 Free PMC article.
Klebsiella pneumoniae induces host metabolic stress that promotes tolerance to pulmonary infection.
Wong Fok Lung T, Charytonowicz D, Beaumont KG, Shah SS, Sridhar SH, Gorrie CL, Mu A, Hofstaedter CE, Varisco D, McConville TH, Drikic M, Fowler B, Urso A, Shi W, Fucich D, Annavajhala MK, Khan IN, Oussenko I, Francoeur N, Smith ML, Stockwell BR, Lewis IA, Hachani A, Upadhyay Baskota S, Uhlemann AC, Ahn D, Ernst RK, Howden BP, Sebra R, Prince A. Wong Fok Lung T, et al. Among authors: oussenko i. Cell Metab. 2022 May 3;34(5):761-774.e9. doi: 10.1016/j.cmet.2022.03.009. Epub 2022 Apr 11. Cell Metab. 2022. PMID: 35413274 Free PMC article.
Analysis of mRNA decay in Bacillus subtilis.
Bechhofer DH, Oussenko IA, Deikus G, Yao S, Mathy N, Condon C. Bechhofer DH, et al. Methods Enzymol. 2008;447:259-76. doi: 10.1016/S0076-6879(08)02214-3. Methods Enzymol. 2008. PMID: 19161848
Assay of Bacillus subtilis ribonucleases in vitro.
Condon C, Pellegrini O, Mathy N, Bénard L, Redko Y, Oussenko IA, Deikus G, Bechhofer DH. Condon C, et al. Among authors: oussenko ia. Methods Enzymol. 2008;447:277-308. doi: 10.1016/S0076-6879(08)02215-5. Methods Enzymol. 2008. PMID: 19161849
18 results