Shannon CP - Search Results

1

Clinical Protocol for a Longitudinal Cohort Study Employing Systems Biology to Identify Markers of Vaccine Immunogenicity in Newborn Infants in The Gambia and Papua New Guinea.

Idoko OT, Smolen KK, Wariri O, Imam A, Shannon CP, Dibassey T, Diray-Arce J, Darboe A, Strandmark J, Ben-Othman R, Odumade OA, McEnaney K, Amenyogbe N, Pomat WS, van Haren S, Sanchez-Schmitz G, Brinkman RR, Steen H, Hancock REW, Tebbutt SJ, Richmond PC, van den Biggelaar AHJ, Kollmann TR, Levy O, Ozonoff A, Kampmann B. Idoko OT, et al. Among authors: shannon cp. Front Pediatr. 2020 Apr 30;8:197. doi: 10.3389/fped.2020.00197. eCollection 2020. Front Pediatr. 2020. PMID: 32426309 Free PMC article.

2

White blood cell differentials enrich whole blood expression data in the context of acute cardiac allograft rejection.

Shannon CP, Hollander Z, Wilson-McManus J, Balshaw R, Ng RT, McMaster R, McManus BM, Keown PA, Tebbutt SJ. Shannon CP, et al. Bioinform Biol Insights. 2012;6:49-61. doi: 10.4137/BBI.S9197. Epub 2012 Apr 10. Bioinform Biol Insights. 2012. PMID: 22550401 Free PMC article.

3

Variation in RNA-Seq transcriptome profiles of peripheral whole blood from healthy individuals with and without globin depletion.

Shin H, Shannon CP, Fishbane N, Ruan J, Zhou M, Balshaw R, Wilson-McManus JE, Ng RT, McManus BM, Tebbutt SJ; PROOF Centre of Excellence Team. Shin H, et al. Among authors: shannon cp. PLoS One. 2014 Mar 7;9(3):e91041. doi: 10.1371/journal.pone.0091041. eCollection 2014. PLoS One. 2014. PMID: 24608128 Free PMC article.

4

Two-stage, in silico deconvolution of the lymphocyte compartment of the peripheral whole blood transcriptome in the context of acute kidney allograft rejection.

Shannon CP, Balshaw R, Ng RT, Wilson-McManus JE, Keown P, McMaster R, McManus BM, Landsberg D, Isbel NM, Knoll G, Tebbutt SJ. Shannon CP, et al. PLoS One. 2014 Apr 14;9(4):e95224. doi: 10.1371/journal.pone.0095224. eCollection 2014. PLoS One. 2014. PMID: 24733377 Free PMC article.

5

Transcriptional Changes of Blood Eosinophils After Methacholine Inhalation Challenge in Asthmatics.

Tebbutt SJ, He JQ, Singh A, Shannon CP, Ruan J, Carlsten C. Tebbutt SJ, et al. Among authors: shannon cp. Genomics Insights. 2012 Jan 30;5:1-12. doi: 10.4137/GEI.S9125. eCollection 2012. Genomics Insights. 2012. PMID: 26217105 Free PMC article.

6

Identifying Molecular Mechanisms of the Late-Phase Asthmatic Response by Integrating Cellular, Gene, and Metabolite Levels in Blood.

Singh A, Shannon CP, Kim YW, DeMarco ML, Gauvreau GM, FitzGerald JM, Boulet LP, O'Byrne PM, Le Cao KA, Tebbutt SJ. Singh A, et al. Among authors: shannon cp. Ann Am Thorac Soc. 2016 Mar;13 Suppl 1:S98. doi: 10.1513/AnnalsATS.201510-694MG. Ann Am Thorac Soc. 2016. PMID: 27027968

7

SABRE: a method for assessing the stability of gene modules in complex tissues and subject populations.

Shannon CP, Chen V, Takhar M, Hollander Z, Balshaw R, McManus BM, Tebbutt SJ, Sin DD, Ng RT. Shannon CP, et al. BMC Bioinformatics. 2016 Nov 14;17(1):460. doi: 10.1186/s12859-016-1319-8. BMC Bioinformatics. 2016. PMID: 27842512 Free PMC article.

8

Enumerateblood - an R package to estimate the cellular composition of whole blood from Affymetrix Gene ST gene expression profiles.

Shannon CP, Balshaw R, Chen V, Hollander Z, Toma M, McManus BM, FitzGerald JM, Sin DD, Ng RT, Tebbutt SJ. Shannon CP, et al. BMC Genomics. 2017 Jan 6;18(1):43. doi: 10.1186/s12864-016-3460-1. BMC Genomics. 2017. PMID: 28061752 Free PMC article.

9

Differentiating heart failure phenotypes using sex-specific transcriptomic and proteomic biomarker panels.

Toma M, Mak GJ, Chen V, Hollander Z, Shannon CP, Lam KKY, Ng RT, Tebbutt SJ, Wilson-McManus JE, Ignaszewski A, Anderson T, Dyck JRB, Howlett J, Ezekowitz J, McManus BM, Oudit GY. Toma M, et al. Among authors: shannon cp. ESC Heart Fail. 2017 Aug;4(3):301-311. doi: 10.1002/ehf2.12136. Epub 2017 Mar 4. ESC Heart Fail. 2017. PMID: 28772032 Free PMC article.

10

Investigating Immune Gene Signatures in Peripheral Blood from Subjects with Allergic Rhinitis Undergoing Nasal Allergen Challenge.

Kim YW, Singh A, Shannon CP, Thiele J, Steacy LM, Ellis AK, Neighbour H, Gliddon DR, Hickey PLC, Larché M, Tebbutt SJ. Kim YW, et al. Among authors: shannon cp. J Immunol. 2017 Nov 15;199(10):3395-3405. doi: 10.4049/jimmunol.1700378. Epub 2017 Oct 18. J Immunol. 2017. PMID: 29046347

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