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Genomic epidemiology and longitudinal sampling of ward wastewater environments and patients reveals complexity of the transmission dynamics of bla KPC-carbapenemase-producing Enterobacterales in a hospital setting.
Stoesser N, George R, Aiken Z, Phan HTT, Lipworth S, Quan TP, Mathers AJ, De Maio N, Seale AC, Eyre DW, Vaughan A, Swann J, Peto TEA, Crook DW, Cawthorne J, Dodgson A, Walker AS; TRACE Investigators Group. Stoesser N, et al. Among authors: de maio n. JAC Antimicrob Resist. 2024 Sep 3;6(5):dlae140. doi: 10.1093/jacamr/dlae140. eCollection 2024 Oct. JAC Antimicrob Resist. 2024. PMID: 39234218 Free PMC article.
SWAMPy: simulating SARS-CoV-2 wastewater amplicon metagenomes.
Boulton W, Fidan FR, Denise H, De Maio N, Goldman N. Boulton W, et al. Among authors: de maio n. Bioinformatics. 2024 Sep 2;40(9):btae532. doi: 10.1093/bioinformatics/btae532. Bioinformatics. 2024. PMID: 39226177 Free PMC article.
BAG3 in cardiovascular diseases.
De Maio N, De Marco M. De Maio N, et al. Cardiovasc Pathol. 2024 Aug 21;74:107687. doi: 10.1016/j.carpath.2024.107687. Online ahead of print. Cardiovasc Pathol. 2024. PMID: 39173696 No abstract available.
CMAPLE: Efficient Phylogenetic Inference in the Pandemic Era.
Ly-Trong N, Bielow C, De Maio N, Minh BQ. Ly-Trong N, et al. Among authors: de maio n. Mol Biol Evol. 2024 Jul 3;41(7):msae134. doi: 10.1093/molbev/msae134. Mol Biol Evol. 2024. PMID: 38934791 Free PMC article.
Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny.
Hunt M, Hinrichs AS, Anderson D, Karim L, Dearlove BL, Knaggs J, Constantinides B, Fowler PW, Rodger G, Street T, Lumley S, Webster H, Sanderson T, Ruis C, de Maio N, Amenga-Etego LN, Amuzu DSY, Avaro M, Awandare GA, Ayivor-Djanie R, Bashton M, Batty EM, Bediako Y, De Belder D, Benedetti E, Bergthaler A, Boers SA, Campos J, Carr RAA, Cuba F, Dattero ME, Dejnirattisai W, Dilthey A, Duedu KO, Endler L, Engelmann I, Francisco NM, Fuchs J, Gnimpieba EZ, Groc S, Gyamfi J, Heemskerk D, Houwaart T, Hsiao NY, Huska M, Hölzer M, Iranzadeh A, Jarva H, Jeewandara C, Jolly B, Joseph R, Kant R, Ki KKK, Kurkela S, Lappalainen M, Lataretu M, Liu C, Malavige GN, Mashe T, Mongkolsapaya J, Montes B, Molina Mora JA, Morang'a CM, Mvula B, Nagarajan N, Nelson A, Ngoi JM, da Paixão JP, Panning M, Poklepovich T, Quashie PK, Ranasinghe D, Russo M, San JE, Sanderson ND, Scaria V, Screaton G, Sironen T, Sisay A, Smith D, Smura T, Supasa P, Suphavilai C, Swann J, Tegally H, Tegomoh B, Vapalahti O, Walker A, Wilkinson RJ, Williamson C; IMSSC2 Laboratory Network Consortium; de Oliveira T, Peto TE, Crook D, Corbett-Detig R, Iqbal Z. Hunt M, et al. Among authors: de maio n. bioRxiv [Preprint]. 2024 Apr 30:2024.04.29.591666. doi: 10.1101/2024.04.29.591666. bioRxiv. 2024. PMID: 38746185 Free PMC article. Preprint.
Pilot study to evaluate the need and implementation of a multifaceted nurse-led antimicrobial stewardship intervention in residential aged care.
Jokanovic N, Lee SJ, Haines T, Hilmer SN, Jeon YH, Travis L, Ayton D, Watson E, Tsindos T, Stewardson AJ, Stuart RL, Cheng AC, Peel TN, Peleg AY; START Trial Group. Jokanovic N, et al. JAC Antimicrob Resist. 2024 Feb 14;6(1):dlae016. doi: 10.1093/jacamr/dlae016. eCollection 2024 Feb. JAC Antimicrob Resist. 2024. PMID: 38371999 Free PMC article.
SARS-CoV-2 lineage assignments using phylogenetic placement/UShER are superior to pangoLEARN machine-learning method.
de Bernardi Schneider A, Su M, Hinrichs AS, Wang J, Amin H, Bell J, Wadford DA, O'Toole Á, Scher E, Perry MD, Turakhia Y, De Maio N, Hughes S, Corbett-Detig R. de Bernardi Schneider A, et al. Among authors: de maio n. Virus Evol. 2024 Jan 11;10(1):vead085. doi: 10.1093/ve/vead085. eCollection 2024. Virus Evol. 2024. PMID: 38361813 Free PMC article.
64 results