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Page 1
Sleep-wake cycles drive daily dynamics of synaptic phosphorylation.
Brüning F, Noya SB, Bange T, Koutsouli S, Rudolph JD, Tyagarajan SK, Cox J, Mann M, Brown SA, Robles MS. Brüning F, et al. Among authors: rudolph jd. Science. 2019 Oct 11;366(6462):eaav3617. doi: 10.1126/science.aav3617. Science. 2019. PMID: 31601740
MaxQuant goes Linux.
Sinitcyn P, Tiwary S, Rudolph J, Gutenbrunner P, Wichmann C, Yılmaz Ş, Hamzeiy H, Salinas F, Cox J. Sinitcyn P, et al. Nat Methods. 2018 Jun;15(6):401. doi: 10.1038/s41592-018-0018-y. Nat Methods. 2018. PMID: 29855570 No abstract available.
MaxDIA enables library-based and library-free data-independent acquisition proteomics.
Sinitcyn P, Hamzeiy H, Salinas Soto F, Itzhak D, McCarthy F, Wichmann C, Steger M, Ohmayer U, Distler U, Kaspar-Schoenefeld S, Prianichnikov N, Yılmaz Ş, Rudolph JD, Tenzer S, Perez-Riverol Y, Nagaraj N, Humphrey SJ, Cox J. Sinitcyn P, et al. Among authors: rudolph jd. Nat Biotechnol. 2021 Dec;39(12):1563-1573. doi: 10.1038/s41587-021-00968-7. Epub 2021 Jul 8. Nat Biotechnol. 2021. PMID: 34239088 Free PMC article.
JSBML 1.0: providing a smorgasbord of options to encode systems biology models.
Rodriguez N, Thomas A, Watanabe L, Vazirabad IY, Kofia V, Gómez HF, Mittag F, Matthes J, Rudolph J, Wrzodek F, Netz E, Diamantikos A, Eichner J, Keller R, Wrzodek C, Fröhlich S, Lewis NE, Myers CJ, Le Novère N, Palsson BØ, Hucka M, Dräger A. Rodriguez N, et al. Bioinformatics. 2015 Oct 15;31(20):3383-6. doi: 10.1093/bioinformatics/btv341. Epub 2015 Jun 16. Bioinformatics. 2015. PMID: 26079347 Free PMC article.
Patients with abdominal aortic aneurysms have reduced levels of microRNA 122-5p in circulating exosomes.
Lopez JL, Ramirez JL, Phu TA, Duong P, Bouchareychas L, Kuhrau CR, Lin PY, Eckalbar WL, Barczak AJ, Rudolph JD, Maliskova L, Conte MS, Vartanian SM, Raffai RL, Oskowitz AZ. Lopez JL, et al. Among authors: rudolph jd. PLoS One. 2023 Feb 14;18(2):e0281371. doi: 10.1371/journal.pone.0281371. eCollection 2023. PLoS One. 2023. PMID: 36787323 Free PMC article.