Seok C - Search Results

1

Assessment of protein model structure accuracy estimation in CASP13: Challenges in the era of deep learning.

Won J, Baek M, Monastyrskyy B, Kryshtafovych A, Seok C. Won J, et al. Among authors: seok c. Proteins. 2019 Dec;87(12):1351-1360. doi: 10.1002/prot.25804. Epub 2019 Aug 30. Proteins. 2019. PMID: 31436360 Free PMC article.

2

A statistical rescoring scheme for protein-ligand docking: Consideration of entropic effect.

Lee J, Seok C. Lee J, et al. Among authors: seok c. Proteins. 2008 Feb 15;70(3):1074-83. doi: 10.1002/prot.21844. Proteins. 2008. PMID: 18076034

3

Protein loop modeling by using fragment assembly and analytical loop closure.

Lee J, Lee D, Park H, Coutsias EA, Seok C. Lee J, et al. Among authors: seok c. Proteins. 2010 Dec;78(16):3428-36. doi: 10.1002/prot.22849. Epub 2010 Sep 24. Proteins. 2010. PMID: 20872556 Free PMC article.

4

De novo protein structure prediction by dynamic fragment assembly and conformational space annealing.

Lee J, Lee J, Sasaki TN, Sasai M, Seok C, Lee J. Lee J, et al. Among authors: seok c. Proteins. 2011 Aug;79(8):2403-17. doi: 10.1002/prot.23059. Epub 2011 May 20. Proteins. 2011. PMID: 21604307

5

Refinement of protein termini in template-based modeling using conformational space annealing.

Park H, Ko J, Joo K, Lee J, Seok C, Lee J. Park H, et al. Among authors: seok c. Proteins. 2011 Sep;79(9):2725-34. doi: 10.1002/prot.23101. Epub 2011 Jul 13. Proteins. 2011. PMID: 21755541

6

Refinement of unreliable local regions in template-based protein models.

Park H, Seok C. Park H, et al. Among authors: seok c. Proteins. 2012 Aug;80(8):1974-86. doi: 10.1002/prot.24086. Epub 2012 May 23. Proteins. 2012. PMID: 22488760

7

GalaxyWEB server for protein structure prediction and refinement.

Ko J, Park H, Heo L, Seok C. Ko J, et al. Among authors: seok c. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W294-7. doi: 10.1093/nar/gks493. Epub 2012 May 30. Nucleic Acids Res. 2012. PMID: 22649060 Free PMC article.

8

GalaxyTBM: template-based modeling by building a reliable core and refining unreliable local regions.

Ko J, Park H, Seok C. Ko J, et al. Among authors: seok c. BMC Bioinformatics. 2012 Aug 10;13:198. doi: 10.1186/1471-2105-13-198. BMC Bioinformatics. 2012. PMID: 22883815 Free PMC article.

9

GalaxyGemini: a web server for protein homo-oligomer structure prediction based on similarity.

Lee H, Park H, Ko J, Seok C. Lee H, et al. Among authors: seok c. Bioinformatics. 2013 Apr 15;29(8):1078-80. doi: 10.1093/bioinformatics/btt079. Epub 2013 Feb 14. Bioinformatics. 2013. PMID: 23413437

10

New molecular interaction of IIA(Ntr) and HPr from Burkholderia pseudomallei identified by X-ray crystallography and docking studies.

Kim MS, Lee H, Heo L, Lim A, Seok C, Shin DH. Kim MS, et al. Among authors: seok c. Proteins. 2013 Sep;81(9):1499-508. doi: 10.1002/prot.24275. Proteins. 2013. PMID: 23483653

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