Wang D - Search Results

1

Deep Learning Enhancing Kinome-Wide Polypharmacology Profiling: Model Construction and Experiment Validation.

Li X, Li Z, Wu X, Xiong Z, Yang T, Fu Z, Liu X, Tan X, Zhong F, Wan X, Wang D, Ding X, Yang R, Hou H, Li C, Liu H, Chen K, Jiang H, Zheng M. Li X, et al. Among authors: wang d. J Med Chem. 2020 Aug 27;63(16):8723-8737. doi: 10.1021/acs.jmedchem.9b00855. Epub 2019 Aug 15. J Med Chem. 2020. PMID: 31364850

2

Pushing the Boundaries of Molecular Representation for Drug Discovery with the Graph Attention Mechanism.

Xiong Z, Wang D, Liu X, Zhong F, Wan X, Li X, Li Z, Luo X, Chen K, Jiang H, Zheng M. Xiong Z, et al. Among authors: wang d. J Med Chem. 2020 Aug 27;63(16):8749-8760. doi: 10.1021/acs.jmedchem.9b00959. Epub 2019 Aug 27. J Med Chem. 2020. PMID: 31408336

3

Improving the Virtual Screening Ability of Target-Specific Scoring Functions Using Deep Learning Methods.

Wang D, Cui C, Ding X, Xiong Z, Zheng M, Luo X, Jiang H, Chen K. Wang D, et al. Front Pharmacol. 2019 Aug 22;10:924. doi: 10.3389/fphar.2019.00924. eCollection 2019. Front Pharmacol. 2019. PMID: 31507420 Free PMC article.

4

Bioactivity Prediction Based on Matched Molecular Pair and Matched Molecular Series Methods.

Ding X, Cui C, Wang D, Zhao J, Zheng M, Luo X, Jiang H, Chen K. Ding X, et al. Among authors: wang d. Curr Pharm Des. 2020;26(33):4195-4205. doi: 10.2174/1381612826666200427111309. Curr Pharm Des. 2020. PMID: 32338210

5

TransformerCPI: improving compound-protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments.

Chen L, Tan X, Wang D, Zhong F, Liu X, Yang T, Luo X, Chen K, Jiang H, Zheng M. Chen L, et al. Among authors: wang d. Bioinformatics. 2020 Aug 15;36(16):4406-4414. doi: 10.1093/bioinformatics/btaa524. Bioinformatics. 2020. PMID: 32428219

6

Drug repurposing against breast cancer by integrating drug-exposure expression profiles and drug-drug links based on graph neural network.

Cui C, Ding X, Wang D, Chen L, Xiao F, Xu T, Zheng M, Luo X, Jiang H, Chen K. Cui C, et al. Among authors: wang d. Bioinformatics. 2021 Sep 29;37(18):2930-2937. doi: 10.1093/bioinformatics/btab191. Bioinformatics. 2021. PMID: 33739367 Free PMC article.

7

Discovery of Cyclic Peptidomimetic Ligands Targeting the Extracellular Domain of EGFR.

Zheng M, Li C, Zhou M, Jia R, Cai G, She F, Wei L, Wang S, Yu J, Wang D, Calcul L, Sun X, Luo X, Cheng F, Li Q, Wang Y, Cai J. Zheng M, et al. Among authors: wang y, wang d, wang s. J Med Chem. 2021 Aug 12;64(15):11219-11228. doi: 10.1021/acs.jmedchem.1c00607. Epub 2021 Jul 23. J Med Chem. 2021. PMID: 34297567

8

Facing small and biased data dilemma in drug discovery with enhanced federated learning approaches.

Xiong Z, Cheng Z, Lin X, Xu C, Liu X, Wang D, Luo X, Zhang Y, Jiang H, Qiao N, Zheng M. Xiong Z, et al. Among authors: wang d. Sci China Life Sci. 2022 Mar;65(3):529-539. doi: 10.1007/s11427-021-1946-0. Epub 2021 Jul 26. Sci China Life Sci. 2022. PMID: 34319533

9

A hybrid framework for improving uncertainty quantification in deep learning-based QSAR regression modeling.

Wang D, Yu J, Chen L, Li X, Jiang H, Chen K, Zheng M, Luo X. Wang D, et al. J Cheminform. 2021 Sep 20;13(1):69. doi: 10.1186/s13321-021-00551-x. J Cheminform. 2021. PMID: 34544485 Free PMC article.

10

Drug target inference by mining transcriptional data using a novel graph convolutional network framework.

Zhong F, Wu X, Yang R, Li X, Wang D, Fu Z, Liu X, Wan X, Yang T, Fan Z, Zhang Y, Luo X, Chen K, Zhang S, Jiang H, Zheng M. Zhong F, et al. Among authors: wang d. Protein Cell. 2022 Apr;13(4):281-301. doi: 10.1007/s13238-021-00885-0. Epub 2021 Oct 22. Protein Cell. 2022. PMID: 34677780 Free PMC article.

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