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Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.
Ebrahim A, Moreno-Chicano T, Appleby MV, Chaplin AK, Beale JH, Sherrell DA, Duyvesteyn HME, Owada S, Tono K, Sugimoto H, Strange RW, Worrall JAR, Axford D, Owen RL, Hough MA. Ebrahim A, et al. Among authors: sugimoto h. IUCrJ. 2019 May 3;6(Pt 4):543-551. doi: 10.1107/S2052252519003956. eCollection 2019 Jul 1. IUCrJ. 2019. PMID: 31316799 Free PMC article.
Determination of damage-free crystal structure of an X-ray-sensitive protein using an XFEL.
Hirata K, Shinzawa-Itoh K, Yano N, Takemura S, Kato K, Hatanaka M, Muramoto K, Kawahara T, Tsukihara T, Yamashita E, Tono K, Ueno G, Hikima T, Murakami H, Inubushi Y, Yabashi M, Ishikawa T, Yamamoto M, Ogura T, Sugimoto H, Shen JR, Yoshikawa S, Ago H. Hirata K, et al. Among authors: sugimoto h. Nat Methods. 2014 Jul;11(7):734-6. doi: 10.1038/nmeth.2962. Epub 2014 May 11. Nat Methods. 2014. PMID: 24813624
Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate.
Tosha T, Nomura T, Nishida T, Saeki N, Okubayashi K, Yamagiwa R, Sugahara M, Nakane T, Yamashita K, Hirata K, Ueno G, Kimura T, Hisano T, Muramoto K, Sawai H, Takeda H, Mizohata E, Yamashita A, Kanematsu Y, Takano Y, Nango E, Tanaka R, Nureki O, Shoji O, Ikemoto Y, Murakami H, Owada S, Tono K, Yabashi M, Yamamoto M, Ago H, Iwata S, Sugimoto H, Shiro Y, Kubo M. Tosha T, et al. Among authors: sugimoto h. Nat Commun. 2017 Nov 17;8(1):1585. doi: 10.1038/s41467-017-01702-1. Nat Commun. 2017. PMID: 29147002 Free PMC article.
High-throughput structures of protein-ligand complexes at room temperature using serial femtosecond crystallography.
Moreno-Chicano T, Ebrahim A, Axford D, Appleby MV, Beale JH, Chaplin AK, Duyvesteyn HME, Ghiladi RA, Owada S, Sherrell DA, Strange RW, Sugimoto H, Tono K, Worrall JAR, Owen RL, Hough MA. Moreno-Chicano T, et al. Among authors: sugimoto h. IUCrJ. 2019 Oct 10;6(Pt 6):1074-1085. doi: 10.1107/S2052252519011655. eCollection 2019 Nov 1. IUCrJ. 2019. PMID: 31709063 Free PMC article.
Serial Femtosecond Zero Dose Crystallography Captures a Water-Free Distal Heme Site in a Dye-Decolorising Peroxidase to Reveal a Catalytic Role for an Arginine in FeIV =O Formation.
Lučić M, Svistunenko DA, Wilson MT, Chaplin AK, Davy B, Ebrahim A, Axford D, Tosha T, Sugimoto H, Owada S, Dworkowski FSN, Tews I, Owen RL, Hough MA, Worrall JAR. Lučić M, et al. Among authors: sugimoto h. Angew Chem Int Ed Engl. 2020 Nov 23;59(48):21656-21662. doi: 10.1002/anie.202008622. Epub 2020 Sep 23. Angew Chem Int Ed Engl. 2020. PMID: 32780931 Free PMC article.
XFEL Crystal Structures of Peroxidase Compound II.
Kwon H, Basran J, Pathak C, Hussain M, Freeman SL, Fielding AJ, Bailey AJ, Stefanou N, Sparkes HA, Tosha T, Yamashita K, Hirata K, Murakami H, Ueno G, Ago H, Tono K, Yamamoto M, Sawai H, Shiro Y, Sugimoto H, Raven EL, Moody PCE. Kwon H, et al. Among authors: sugimoto h. Angew Chem Int Ed Engl. 2021 Jun 21;60(26):14578-14585. doi: 10.1002/anie.202103010. Epub 2021 May 19. Angew Chem Int Ed Engl. 2021. PMID: 33826799 Free PMC article.
Complementarity of neutron, XFEL and synchrotron crystallography for defining the structures of metalloenzymes at room temperature.
Moreno-Chicano T, Carey LM, Axford D, Beale JH, Doak RB, Duyvesteyn HME, Ebrahim A, Henning RW, Monteiro DCF, Myles DA, Owada S, Sherrell DA, Straw ML, Šrajer V, Sugimoto H, Tono K, Tosha T, Tews I, Trebbin M, Strange RW, Weiss KL, Worrall JAR, Meilleur F, Owen RL, Ghiladi RA, Hough MA. Moreno-Chicano T, et al. Among authors: sugimoto h. IUCrJ. 2022 Jul 25;9(Pt 5):610-624. doi: 10.1107/S2052252522006418. eCollection 2022 Sep 1. IUCrJ. 2022. PMID: 36071813 Free PMC article.
Serial Femtosecond Crystallography Reveals the Role of Water in the One- or Two-Electron Redox Chemistry of Compound I in the Catalytic Cycle of the B-Type Dye-Decolorizing Peroxidase DtpB.
Lučić M, Wilson MT, Tosha T, Sugimoto H, Shilova A, Axford D, Owen RL, Hough MA, Worrall JAR. Lučić M, et al. Among authors: sugimoto h. ACS Catal. 2022 Nov 4;12(21):13349-13359. doi: 10.1021/acscatal.2c03754. Epub 2022 Oct 18. ACS Catal. 2022. PMID: 36366763 Free PMC article.
A redox switch allows binding of Fe(II) and Fe(III) ions in the cyanobacterial iron-binding protein FutA from Prochlorococcus.
Bolton R, Machelett MM, Stubbs J, Axford D, Caramello N, Catapano L, Malý M, Rodrigues MJ, Cordery C, Tizzard GJ, MacMillan F, Engilberge S, von Stetten D, Tosha T, Sugimoto H, Worrall JAR, Webb JS, Zubkov M, Coles S, Mathieu E, Steiner RA, Murshudov G, Schrader TE, Orville AM, Royant A, Evans G, Hough MA, Owen RL, Tews I. Bolton R, et al. Among authors: sugimoto h. Proc Natl Acad Sci U S A. 2024 Mar 19;121(12):e2308478121. doi: 10.1073/pnas.2308478121. Epub 2024 Mar 15. Proc Natl Acad Sci U S A. 2024. PMID: 38489389 Free PMC article.
XFEL Crystal Structures of Peroxidase Compound II.
Kwon H, Basran J, Pathak C, Hussain M, Freeman SL, Fielding AJ, Bailey AJ, Stefanou N, Sparkes HA, Tosha T, Yamashita K, Hirata K, Murakami H, Ueno G, Ago H, Tono K, Yamamoto M, Sawai H, Shiro Y, Sugimoto H, Raven EL, Moody PCE. Kwon H, et al. Among authors: sugimoto h. Angew Chem Weinheim Bergstr Ger. 2021 Jun 21;133(26):14699-14706. doi: 10.1002/ange.202103010. Epub 2021 May 19. Angew Chem Weinheim Bergstr Ger. 2021. PMID: 38505375 Free PMC article.
1,718 results