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Complete Khoisan and Bantu genomes from southern Africa.
Schuster SC, Miller W, Ratan A, Tomsho LP, Giardine B, Kasson LR, Harris RS, Petersen DC, Zhao F, Qi J, Alkan C, Kidd JM, Sun Y, Drautz DI, Bouffard P, Muzny DM, Reid JG, Nazareth LV, Wang Q, Burhans R, Riemer C, Wittekindt NE, Moorjani P, Tindall EA, Danko CG, Teo WS, Buboltz AM, Zhang Z, Ma Q, Oosthuysen A, Steenkamp AW, Oostuisen H, Venter P, Gajewski J, Zhang Y, Pugh BF, Makova KD, Nekrutenko A, Mardis ER, Patterson N, Pringle TH, Chiaromonte F, Mullikin JC, Eichler EE, Hardison RC, Gibbs RA, Harkins TT, Hayes VM. Schuster SC, et al. Among authors: makova kd. Nature. 2010 Feb 18;463(7283):943-7. doi: 10.1038/nature08795. Nature. 2010. PMID: 20164927 Free PMC article.
A time- and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y.
Tomaszkiewicz M, Rangavittal S, Cechova M, Campos Sanchez R, Fescemyer HW, Harris R, Ye D, O'Brien PC, Chikhi R, Ryder OA, Ferguson-Smith MA, Medvedev P, Makova KD. Tomaszkiewicz M, et al. Among authors: makova kd. Genome Res. 2016 Apr;26(4):530-40. doi: 10.1101/gr.199448.115. Epub 2016 Mar 2. Genome Res. 2016. PMID: 26934921 Free PMC article.
Reverse Transcription Errors and RNA-DNA Differences at Short Tandem Repeats.
Fungtammasan A, Tomaszkiewicz M, Campos-Sánchez R, Eckert KA, DeGiorgio M, Makova KD. Fungtammasan A, et al. Among authors: makova kd. Mol Biol Evol. 2016 Oct;33(10):2744-58. doi: 10.1093/molbev/msw139. Epub 2016 Jul 12. Mol Biol Evol. 2016. PMID: 27413049 Free PMC article.
Streamlined analysis of duplex sequencing data with Du Novo.
Stoler N, Arbeithuber B, Guiblet W, Makova KD, Nekrutenko A. Stoler N, et al. Among authors: makova kd. Genome Biol. 2016 Aug 26;17(1):180. doi: 10.1186/s13059-016-1039-4. Genome Biol. 2016. PMID: 27566673 Free PMC article.
Correcting palindromes in long reads after whole-genome amplification.
Warris S, Schijlen E, van de Geest H, Vegesna R, Hesselink T, Te Lintel Hekkert B, Sanchez Perez G, Medvedev P, Makova KD, de Ridder D. Warris S, et al. Among authors: makova kd. BMC Genomics. 2018 Nov 6;19(1):798. doi: 10.1186/s12864-018-5164-1. BMC Genomics. 2018. PMID: 30400848 Free PMC article.
116 results