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Page 1
Paleomicrobiology: Diagnosis and Evolution of Ancient Pathogens.
Bos KI, Kühnert D, Herbig A, Esquivel-Gomez LR, Andrades Valtueña A, Barquera R, Giffin K, Kumar Lankapalli A, Nelson EA, Sabin S, Spyrou MA, Krause J. Bos KI, et al. Among authors: andrades valtuena a. Annu Rev Microbiol. 2019 Sep 8;73:639-666. doi: 10.1146/annurev-micro-090817-062436. Epub 2019 Jul 5. Annu Rev Microbiol. 2019. PMID: 31283430 Review.
The Stone Age Plague and Its Persistence in Eurasia.
Andrades Valtueña A, Mittnik A, Key FM, Haak W, Allmäe R, Belinskij A, Daubaras M, Feldman M, Jankauskas R, Janković I, Massy K, Novak M, Pfrengle S, Reinhold S, Šlaus M, Spyrou MA, Szécsényi-Nagy A, Tõrv M, Hansen S, Bos KI, Stockhammer PW, Herbig A, Krause J. Andrades Valtueña A, et al. Curr Biol. 2017 Dec 4;27(23):3683-3691.e8. doi: 10.1016/j.cub.2017.10.025. Epub 2017 Nov 22. Curr Biol. 2017. PMID: 29174893 Free article.
Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico.
Vågene ÅJ, Herbig A, Campana MG, Robles García NM, Warinner C, Sabin S, Spyrou MA, Andrades Valtueña A, Huson D, Tuross N, Bos KI, Krause J. Vågene ÅJ, et al. Among authors: andrades valtuena a. Nat Ecol Evol. 2018 Mar;2(3):520-528. doi: 10.1038/s41559-017-0446-6. Epub 2018 Jan 15. Nat Ecol Evol. 2018. PMID: 29335577
Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes.
Spyrou MA, Keller M, Tukhbatova RI, Scheib CL, Nelson EA, Andrades Valtueña A, Neumann GU, Walker D, Alterauge A, Carty N, Cessford C, Fetz H, Gourvennec M, Hartle R, Henderson M, von Heyking K, Inskip SA, Kacki S, Key FM, Knox EL, Later C, Maheshwari-Aplin P, Peters J, Robb JE, Schreiber J, Kivisild T, Castex D, Lösch S, Harbeck M, Herbig A, Bos KI, Krause J. Spyrou MA, et al. Among authors: andrades valtuena a. Nat Commun. 2019 Oct 2;10(1):4470. doi: 10.1038/s41467-019-12154-0. Nat Commun. 2019. PMID: 31578321 Free PMC article.
Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague.
Andrades Valtueña A, Neumann GU, Spyrou MA, Musralina L, Aron F, Beisenov A, Belinskiy AB, Bos KI, Buzhilova A, Conrad M, Djansugurova LB, Dobeš M, Ernée M, Fernández-Eraso J, Frohlich B, Furmanek M, Hałuszko A, Hansen S, Harney É, Hiss AN, Hübner A, Key FM, Khussainova E, Kitov E, Kitova AO, Knipper C, Kühnert D, Lalueza-Fox C, Littleton J, Massy K, Mittnik A, Mujika-Alustiza JA, Olalde I, Papac L, Penske S, Peška J, Pinhasi R, Reich D, Reinhold S, Stahl R, Stäuble H, Tukhbatova RI, Vasilyev S, Veselovskaya E, Warinner C, Stockhammer PW, Haak W, Krause J, Herbig A. Andrades Valtueña A, et al. Proc Natl Acad Sci U S A. 2022 Apr 26;119(17):e2116722119. doi: 10.1073/pnas.2116722119. Epub 2022 Apr 11. Proc Natl Acad Sci U S A. 2022. PMID: 35412864 Free PMC article.
Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir.
Fellows Yates JA, Andrades Valtueña A, Vågene ÅJ, Cribdon B, Velsko IM, Borry M, Bravo-Lopez MJ, Fernandez-Guerra A, Green EJ, Ramachandran SL, Heintzman PD, Spyrou MA, Hübner A, Gancz AS, Hider J, Allshouse AF, Zaro V, Warinner C. Fellows Yates JA, et al. Among authors: andrades valtuena a. Sci Data. 2021 Jan 26;8(1):31. doi: 10.1038/s41597-021-00816-y. Sci Data. 2021. PMID: 33500403 Free PMC article.
The genetic prehistory of the Baltic Sea region.
Mittnik A, Wang CC, Pfrengle S, Daubaras M, Zariņa G, Hallgren F, Allmäe R, Khartanovich V, Moiseyev V, Tõrv M, Furtwängler A, Andrades Valtueña A, Feldman M, Economou C, Oinonen M, Vasks A, Balanovska E, Reich D, Jankauskas R, Haak W, Schiffels S, Krause J. Mittnik A, et al. Among authors: andrades valtuena a. Nat Commun. 2018 Jan 30;9(1):442. doi: 10.1038/s41467-018-02825-9. Nat Commun. 2018. PMID: 29382937 Free PMC article.
Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT.
Borry M, Forsythe A, Andrades Valtueña A, Hübner A, Ibrahim A, Quagliariello A, White AE, Kocher A, Vågene ÅJ, Bartholdy BP, Spurīte D, Ponce-Soto GY, Neumann G, Huang IT, Light I, Velsko IM, Jackson I, Frangenberg J, Serrano JG, Fumey J, Özdoğan KT, Blevins KE, Daly KG, Lopopolo M, Moraitou M, Michel M, van Os M, Bravo-Lopez MJ, Sarhan MS, Dagtas ND, Oskolkov N, Smith OS, Lebrasseur O, Rozwalak P, Eisenhofer R, Wasef S, Ramachandran SL, Vanghi V, Warinner C, Fellows Yates JA. Borry M, et al. Among authors: andrades valtuena a. F1000Res. 2024 May 28;12:926. doi: 10.12688/f1000research.134798.2. eCollection 2023. F1000Res. 2024. PMID: 39262445 Free PMC article.
11 results