Sadreyev R - Search Results

1

Mapping global and local coevolution across 600 species to identify novel homologous recombination repair genes.

Sherill-Rofe D, Rahat D, Findlay S, Mellul A, Guberman I, Braun M, Bloch I, Lalezari A, Samiei A, Sadreyev R, Goldberg M, Orthwein A, Zick A, Tabach Y. Sherill-Rofe D, et al. Among authors: sadreyev r. Genome Res. 2019 Mar;29(3):439-448. doi: 10.1101/gr.241414.118. Epub 2019 Feb 4. Genome Res. 2019. PMID: 30718334 Free PMC article.

2

DEPCOD: a tool to detect and visualize co-evolution of protein domains.

Ji F, Bonilla G, Krykbaev R, Ruvkun G, Tabach Y, Sadreyev RI. Ji F, et al. Among authors: sadreyev ri. Nucleic Acids Res. 2022 Jul 5;50(W1):W246-W253. doi: 10.1093/nar/gkac349. Nucleic Acids Res. 2022. PMID: 35536332 Free PMC article.

3

Spreading of X chromosome inactivation via a hierarchy of defined Polycomb stations.

Pinter SF, Sadreyev RI, Yildirim E, Jeon Y, Ohsumi TK, Borowsky M, Lee JT. Pinter SF, et al. Genome Res. 2012 Oct;22(10):1864-76. doi: 10.1101/gr.133751.111. Epub 2012 Sep 4. Genome Res. 2012. PMID: 22948768 Free PMC article.

4

Informatics for molecular biologists.

Sadreyev RI. Sadreyev RI. Curr Protoc Mol Biol. 2014 Apr 14;106:19.0.1-19.0.2. doi: 10.1002/0471142727.mb1900s106. Curr Protoc Mol Biol. 2014. PMID: 24733239 Review. No abstract available.

5

A post-transcriptional program of chemoresistance by AU-rich elements and TTP in quiescent leukemic cells.

Lee S, Micalizzi D, Truesdell SS, Bukhari SIA, Boukhali M, Lombardi-Story J, Kato Y, Choo MK, Dey-Guha I, Ji F, Nicholson BT, Myers DT, Lee D, Mazzola MA, Raheja R, Langenbucher A, Haradhvala NJ, Lawrence MS, Gandhi R, Tiedje C, Diaz-Muñoz MD, Sweetser DA, Sadreyev R, Sykes D, Haas W, Haber DA, Maheswaran S, Vasudevan S. Lee S, et al. Among authors: sadreyev r. Genome Biol. 2020 Feb 10;21(1):33. doi: 10.1186/s13059-020-1936-4. Genome Biol. 2020. PMID: 32039742 Free PMC article.

6

Bimodal quantitative relationships between histone modifications for X-linked and autosomal loci.

Sadreyev RI, Yildirim E, Pinter SF, Lee JT. Sadreyev RI, et al. Proc Natl Acad Sci U S A. 2013 Apr 23;110(17):6949-54. doi: 10.1073/pnas.1216449110. Epub 2013 Apr 5. Proc Natl Acad Sci U S A. 2013. PMID: 23564346 Free PMC article.

7

Next-Generation Sequencing for Identification of EMS-Induced Mutations in Caenorhabditis elegans.

Lehrbach NJ, Ji F, Sadreyev R. Lehrbach NJ, et al. Among authors: sadreyev r. Curr Protoc Mol Biol. 2017 Jan 5;117:7.29.1-7.29.12. doi: 10.1002/cpmb.27. Curr Protoc Mol Biol. 2017. PMID: 28060408 Free PMC article.

8

Genome-wide identification of autosomal genes with allelic imbalance of chromatin state.

Savol AJ, Wang PI, Jeon Y, Colognori D, Yildirim E, Pinter SF, Payer B, Lee JT, Sadreyev RI. Savol AJ, et al. PLoS One. 2017 Aug 10;12(8):e0182568. doi: 10.1371/journal.pone.0182568. eCollection 2017. PLoS One. 2017. PMID: 28796844 Free PMC article.

9

The surveillance of pre-mRNA splicing is an early step in C. elegans RNAi of endogenous genes.

Newman MA, Ji F, Fischer SEJ, Anselmo A, Sadreyev RI, Ruvkun G. Newman MA, et al. Genes Dev. 2018 May 1;32(9-10):670-681. doi: 10.1101/gad.311514.118. Epub 2018 May 8. Genes Dev. 2018. PMID: 29739806 Free PMC article.

10

RNA-seq: Basic Bioinformatics Analysis.

Ji F, Sadreyev RI. Ji F, et al. Curr Protoc Mol Biol. 2018 Oct;124(1):e68. doi: 10.1002/cpmb.68. Epub 2018 Sep 17. Curr Protoc Mol Biol. 2018. PMID: 30222249 Free PMC article.

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