Jiang Y - Search Results

1

CODEX2: full-spectrum copy number variation detection by high-throughput DNA sequencing.

Jiang Y, Wang R, Urrutia E, Anastopoulos IN, Nathanson KL, Zhang NR. Jiang Y, et al. Genome Biol. 2018 Nov 26;19(1):202. doi: 10.1186/s13059-018-1578-y. Genome Biol. 2018. PMID: 30477554 Free PMC article.

2

CODEX: a normalization and copy number variation detection method for whole exome sequencing.

Jiang Y, Oldridge DA, Diskin SJ, Zhang NR. Jiang Y, et al. Nucleic Acids Res. 2015 Mar 31;43(6):e39. doi: 10.1093/nar/gku1363. Epub 2015 Jan 23. Nucleic Acids Res. 2015. PMID: 25618849 Free PMC article.

3

Assessing intratumor heterogeneity and tracking longitudinal and spatial clonal evolutionary history by next-generation sequencing.

Jiang Y, Qiu Y, Minn AJ, Zhang NR. Jiang Y, et al. Proc Natl Acad Sci U S A. 2016 Sep 13;113(37):E5528-37. doi: 10.1073/pnas.1522203113. Epub 2016 Aug 29. Proc Natl Acad Sci U S A. 2016. PMID: 27573852 Free PMC article.

4

SCALE: modeling allele-specific gene expression by single-cell RNA sequencing.

Jiang Y, Zhang NR, Li M. Jiang Y, et al. Genome Biol. 2017 Apr 26;18(1):74. doi: 10.1186/s13059-017-1200-8. Genome Biol. 2017. PMID: 28446220 Free PMC article.

5

BRCA locus-specific loss of heterozygosity in germline BRCA1 and BRCA2 carriers.

Maxwell KN, Wubbenhorst B, Wenz BM, De Sloover D, Pluta J, Emery L, Barrett A, Kraya AA, Anastopoulos IN, Yu S, Jiang Y, Chen H, Zhang NR, Hackman N, D'Andrea K, Daber R, Morrissette JJD, Mitra N, Feldman M, Domchek SM, Nathanson KL. Maxwell KN, et al. Among authors: jiang y. Nat Commun. 2017 Aug 22;8(1):319. doi: 10.1038/s41467-017-00388-9. Nat Commun. 2017. PMID: 28831036 Free PMC article.

6

ALLELE-SPECIFIC COPY NUMBER ESTIMATION BY WHOLE EXOME SEQUENCING.

Chen H, Jiang Y, Maxwell KN, Nathanson KL, Zhang N. Chen H, et al. Among authors: jiang y. Ann Appl Stat. 2017 Jun;11(2):1169-1192. doi: 10.1214/17-AOAS1043. Epub 2017 Jul 20. Ann Appl Stat. 2017. PMID: 28989557 Free PMC article.

7

Genetic and Genomic Characterization of 462 Melanoma Patient-Derived Xenografts, Tumor Biopsies, and Cell Lines.

Garman B, Anastopoulos IN, Krepler C, Brafford P, Sproesser K, Jiang Y, Wubbenhorst B, Amaravadi R, Bennett J, Beqiri M, Elder D, Flaherty KT, Frederick DT, Gangadhar TC, Guarino M, Hoon D, Karakousis G, Liu Q, Mitra N, Petrelli NJ, Schuchter L, Shannan B, Shields CL, Wargo J, Wenz B, Wilson MA, Xiao M, Xu W, Xu X, Yin X, Zhang NR, Davies MA, Herlyn M, Nathanson KL. Garman B, et al. Among authors: jiang y. Cell Rep. 2017 Nov 14;21(7):1936-1952. doi: 10.1016/j.celrep.2017.10.052. Cell Rep. 2017. PMID: 29141224 Free PMC article.

8

Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny.

Urrutia E, Chen H, Zhou Z, Zhang NR, Jiang Y. Urrutia E, et al. Among authors: jiang y. Bioinformatics. 2018 Jun 15;34(12):2126-2128. doi: 10.1093/bioinformatics/bty057. Bioinformatics. 2018. PMID: 29415173 Free PMC article.

9

Single-Cell Allele-Specific Gene Expression Analysis.

Dong M, Jiang Y. Dong M, et al. Among authors: jiang y. Methods Mol Biol. 2019;1935:155-174. doi: 10.1007/978-1-4939-9057-3_11. Methods Mol Biol. 2019. PMID: 30758826

10

Nucleotide excision repair capacity increases during differentiation of human embryonic carcinoma cells into neurons and muscle cells.

Li W, Liu W, Kakoki A, Wang R, Adebali O, Jiang Y, Sancar A. Li W, et al. Among authors: jiang y. J Biol Chem. 2019 Apr 12;294(15):5914-5922. doi: 10.1074/jbc.RA119.007861. Epub 2019 Feb 26. J Biol Chem. 2019. PMID: 30808711 Free PMC article.

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