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New tools for the analysis and validation of cryo-EM maps and atomic models.
Afonine PV, Klaholz BP, Moriarty NW, Poon BK, Sobolev OV, Terwilliger TC, Adams PD, Urzhumtsev A. Afonine PV, et al. Acta Crystallogr D Struct Biol. 2018 Sep 1;74(Pt 9):814-840. doi: 10.1107/S2059798318009324. Epub 2018 Sep 3. Acta Crystallogr D Struct Biol. 2018. PMID: 30198894 Free PMC article.
Likelihood-based refinement. I. Irremovable model errors.
Lunin VY, Afonine PV, Urzhumtsev AG. Lunin VY, et al. Among authors: afonine pv. Acta Crystallogr A. 2002 May;58(Pt 3):270-82. doi: 10.1107/s0108767302001046. Epub 2002 Apr 18. Acta Crystallogr A. 2002. PMID: 11961289
A robust bulk-solvent correction and anisotropic scaling procedure.
Afonine PV, Grosse-Kunstleve RW, Adams PD. Afonine PV, et al. Acta Crystallogr D Biol Crystallogr. 2005 Jul;61(Pt 7):850-5. doi: 10.1107/S0907444905007894. Epub 2005 Jun 24. Acta Crystallogr D Biol Crystallogr. 2005. PMID: 15983406 Free PMC article.
Interpretation of ensembles created by multiple iterative rebuilding of macromolecular models.
Terwilliger TC, Grosse-Kunstleve RW, Afonine PV, Adams PD, Moriarty NW, Zwart P, Read RJ, Turk D, Hung LW. Terwilliger TC, et al. Among authors: afonine pv. Acta Crystallogr D Biol Crystallogr. 2007 May;63(Pt 5):597-610. doi: 10.1107/S0907444907009791. Epub 2007 Apr 21. Acta Crystallogr D Biol Crystallogr. 2007. PMID: 17452785 Free PMC article.
Protein structures by spallation neutron crystallography.
Langan P, Fisher Z, Kovalevsky A, Mustyakimov M, Sutcliffe Valone A, Unkefer C, Waltman MJ, Coates L, Adams PD, Afonine PV, Bennett B, Dealwis C, Schoenborn BP. Langan P, et al. Among authors: afonine pv. J Synchrotron Radiat. 2008 May;15(Pt 3):215-8. doi: 10.1107/S0909049508000824. Epub 2008 Apr 18. J Synchrotron Radiat. 2008. PMID: 18421142 Free PMC article.
98 results