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XCMS-MRM and METLIN-MRM: a cloud library and public resource for targeted analysis of small molecules.
Domingo-Almenara X, Montenegro-Burke JR, Ivanisevic J, Thomas A, Sidibé J, Teav T, Guijas C, Aisporna AE, Rinehart D, Hoang L, Nordström A, Gómez-Romero M, Whiley L, Lewis MR, Nicholson JK, Benton HP, Siuzdak G. Domingo-Almenara X, et al. Among authors: rinehart d. Nat Methods. 2018 Sep;15(9):681-684. doi: 10.1038/s41592-018-0110-3. Epub 2018 Aug 27. Nat Methods. 2018. PMID: 30150755 Free PMC article.
Systems biology guided by XCMS Online metabolomics.
Huan T, Forsberg EM, Rinehart D, Johnson CH, Ivanisevic J, Benton HP, Fang M, Aisporna A, Hilmers B, Poole FL, Thorgersen MP, Adams MWW, Krantz G, Fields MW, Robbins PD, Niedernhofer LJ, Ideker T, Majumder EL, Wall JD, Rattray NJW, Goodacre R, Lairson LL, Siuzdak G. Huan T, et al. Among authors: rinehart d. Nat Methods. 2017 Apr 27;14(5):461-462. doi: 10.1038/nmeth.4260. Nat Methods. 2017. PMID: 28448069 Free PMC article. No abstract available.
Metabolomic data streaming for biology-dependent data acquisition.
Rinehart D, Johnson CH, Nguyen T, Ivanisevic J, Benton HP, Lloyd J, Arkin AP, Deutschbauer AM, Patti GJ, Siuzdak G. Rinehart D, et al. Nat Biotechnol. 2014 Jun;32(6):524-7. doi: 10.1038/nbt.2927. Nat Biotechnol. 2014. PMID: 24911492 Free PMC article. No abstract available.
Interactive XCMS Online: simplifying advanced metabolomic data processing and subsequent statistical analyses.
Gowda H, Ivanisevic J, Johnson CH, Kurczy ME, Benton HP, Rinehart D, Nguyen T, Ray J, Kuehl J, Arevalo B, Westenskow PD, Wang J, Arkin AP, Deutschbauer AM, Patti GJ, Siuzdak G. Gowda H, et al. Among authors: rinehart d. Anal Chem. 2014 Jul 15;86(14):6931-9. doi: 10.1021/ac500734c. Epub 2014 Jun 25. Anal Chem. 2014. PMID: 24934772 Free PMC article.
Autonomous metabolomics for rapid metabolite identification in global profiling.
Benton HP, Ivanisevic J, Mahieu NG, Kurczy ME, Johnson CH, Franco L, Rinehart D, Valentine E, Gowda H, Ubhi BK, Tautenhahn R, Gieschen A, Fields MW, Patti GJ, Siuzdak G. Benton HP, et al. Among authors: rinehart d. Anal Chem. 2015 Jan 20;87(2):884-91. doi: 10.1021/ac5025649. Epub 2014 Dec 26. Anal Chem. 2015. PMID: 25496351 Free PMC article.
Determining conserved metabolic biomarkers from a million database queries.
Kurczy ME, Ivanisevic J, Johnson CH, Uritboonthai W, Hoang L, Fang M, Hicks M, Aldebot A, Rinehart D, Mellander LJ, Tautenhahn R, Patti GJ, Spilker ME, Benton HP, Siuzdak G. Kurczy ME, et al. Among authors: rinehart d. Bioinformatics. 2015 Dec 1;31(23):3721-4. doi: 10.1093/bioinformatics/btv475. Epub 2015 Aug 13. Bioinformatics. 2015. PMID: 26275895 Free PMC article.
Smartphone Analytics: Mobilizing the Lab into the Cloud for Omic-Scale Analyses.
Montenegro-Burke JR, Phommavongsay T, Aisporna AE, Huan T, Rinehart D, Forsberg E, Poole FL, Thorgersen MP, Adams MW, Krantz G, Fields MW, Northen TR, Robbins PD, Niedernhofer LJ, Lairson L, Benton HP, Siuzdak G. Montenegro-Burke JR, et al. Among authors: rinehart d. Anal Chem. 2016 Oct 4;88(19):9753-9758. doi: 10.1021/acs.analchem.6b02676. Epub 2016 Sep 15. Anal Chem. 2016. PMID: 27560777 Free PMC article.
Data Streaming for Metabolomics: Accelerating Data Processing and Analysis from Days to Minutes.
Montenegro-Burke JR, Aisporna AE, Benton HP, Rinehart D, Fang M, Huan T, Warth B, Forsberg E, Abe BT, Ivanisevic J, Wolan DW, Teyton L, Lairson L, Siuzdak G. Montenegro-Burke JR, et al. Among authors: rinehart d. Anal Chem. 2017 Jan 17;89(2):1254-1259. doi: 10.1021/acs.analchem.6b03890. Epub 2017 Jan 3. Anal Chem. 2017. PMID: 27983788 Free PMC article.
80 results