Fookes MC - Search Results

1

Mycoplasma genitalium: whole genome sequence analysis, recombination and population structure.

Fookes MC, Hadfield J, Harris S, Parmar S, Unemo M, Jensen JS, Thomson NR. Fookes MC, et al. BMC Genomics. 2017 Dec 28;18(1):993. doi: 10.1186/s12864-017-4399-6. BMC Genomics. 2017. PMID: 29281972 Free PMC article.

2

Composition, acquisition, and distribution of the Vi exopolysaccharide-encoding Salmonella enterica pathogenicity island SPI-7.

Pickard D, Wain J, Baker S, Line A, Chohan S, Fookes M, Barron A, Gaora PO, Chabalgoity JA, Thanky N, Scholes C, Thomson N, Quail M, Parkhill J, Dougan G. Pickard D, et al. J Bacteriol. 2003 Sep;185(17):5055-65. doi: 10.1128/JB.185.17.5055-5065.2003. J Bacteriol. 2003. PMID: 12923078 Free PMC article.

3

The role of prophage-like elements in the diversity of Salmonella enterica serovars.

Thomson N, Baker S, Pickard D, Fookes M, Anjum M, Hamlin N, Wain J, House D, Bhutta Z, Chan K, Falkow S, Parkhill J, Woodward M, Ivens A, Dougan G. Thomson N, et al. J Mol Biol. 2004 May 28;339(2):279-300. doi: 10.1016/j.jmb.2004.03.058. J Mol Biol. 2004. PMID: 15136033

4

Prophage sequences defining hot spots of genome variation in Salmonella enterica serovar Typhimurium can be used to discriminate between field isolates.

Cooke FJ, Wain J, Fookes M, Ivens A, Thomson N, Brown DJ, Threlfall EJ, Gunn G, Foster G, Dougan G. Cooke FJ, et al. J Clin Microbiol. 2007 Aug;45(8):2590-8. doi: 10.1128/JCM.00729-07. Epub 2007 May 23. J Clin Microbiol. 2007. PMID: 17522270 Free PMC article.

5

Characterization of the genomes of a diverse collection of Salmonella enterica serovar Typhimurium definitive phage type 104.

Cooke FJ, Brown DJ, Fookes M, Pickard D, Ivens A, Wain J, Roberts M, Kingsley RA, Thomson NR, Dougan G. Cooke FJ, et al. J Bacteriol. 2008 Dec;190(24):8155-62. doi: 10.1128/JB.00636-08. Epub 2008 Oct 10. J Bacteriol. 2008. PMID: 18849424 Free PMC article.

6

A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi.

Perkins TT, Kingsley RA, Fookes MC, Gardner PP, James KD, Yu L, Assefa SA, He M, Croucher NJ, Pickard DJ, Maskell DJ, Parkhill J, Choudhary J, Thomson NR, Dougan G. Perkins TT, et al. Among authors: fookes mc. PLoS Genet. 2009 Jul;5(7):e1000569. doi: 10.1371/journal.pgen.1000569. Epub 2009 Jul 17. PLoS Genet. 2009. PMID: 19609351 Free PMC article.

7

A simple method for directional transcriptome sequencing using Illumina technology.

Croucher NJ, Fookes MC, Perkins TT, Turner DJ, Marguerat SB, Keane T, Quail MA, He M, Assefa S, Bähler J, Kingsley RA, Parkhill J, Bentley SD, Dougan G, Thomson NR. Croucher NJ, et al. Among authors: fookes mc. Nucleic Acids Res. 2009 Dec;37(22):e148. doi: 10.1093/nar/gkp811. Nucleic Acids Res. 2009. PMID: 19815668 Free PMC article.

8

Genomic and phenotypic variation in epidemic-spanning Salmonella enterica serovar Enteritidis isolates.

Betancor L, Yim L, Fookes M, Martinez A, Thomson NR, Ivens A, Peters S, Bryant C, Algorta G, Kariuki S, Schelotto F, Maskell D, Dougan G, Chabalgoity JA. Betancor L, et al. BMC Microbiol. 2009 Nov 18;9:237. doi: 10.1186/1471-2180-9-237. BMC Microbiol. 2009. PMID: 19922635 Free PMC article.

9

Citrobacter rodentium is an unstable pathogen showing evidence of significant genomic flux.

Petty NK, Feltwell T, Pickard D, Clare S, Toribio AL, Fookes M, Roberts K, Monson R, Nair S, Kingsley RA, Bulgin R, Wiles S, Goulding D, Keane T, Corton C, Lennard N, Harris D, Willey D, Rance R, Yu L, Choudhary JS, Churcher C, Quail MA, Parkhill J, Frankel G, Dougan G, Salmond GP, Thomson NR. Petty NK, et al. PLoS Pathog. 2011 Apr;7(4):e1002018. doi: 10.1371/journal.ppat.1002018. Epub 2011 Apr 7. PLoS Pathog. 2011. PMID: 21490962 Free PMC article.

10

Salmonella bongori provides insights into the evolution of the Salmonellae.

Fookes M, Schroeder GN, Langridge GC, Blondel CJ, Mammina C, Connor TR, Seth-Smith H, Vernikos GS, Robinson KS, Sanders M, Petty NK, Kingsley RA, Bäumler AJ, Nuccio SP, Contreras I, Santiviago CA, Maskell D, Barrow P, Humphrey T, Nastasi A, Roberts M, Frankel G, Parkhill J, Dougan G, Thomson NR. Fookes M, et al. PLoS Pathog. 2011 Aug;7(8):e1002191. doi: 10.1371/journal.ppat.1002191. Epub 2011 Aug 18. PLoS Pathog. 2011. PMID: 21876672 Free PMC article.

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