Marioni JC - Search Results

1

Isolation and Comparative Transcriptome Analysis of Human Fetal and iPSC-Derived Cone Photoreceptor Cells.

Welby E, Lakowski J, Di Foggia V, Budinger D, Gonzalez-Cordero A, Lun ATL, Epstein M, Patel A, Cuevas E, Kruczek K, Naeem A, Minneci F, Hubank M, Jones DT, Marioni JC, Ali RR, Sowden JC. Welby E, et al. Among authors: marioni jc. Stem Cell Reports. 2017 Dec 12;9(6):1898-1915. doi: 10.1016/j.stemcr.2017.10.018. Epub 2017 Nov 16. Stem Cell Reports. 2017. PMID: 29153988 Free PMC article.

2

Random monoallelic gene expression increases upon embryonic stem cell differentiation.

Eckersley-Maslin MA, Thybert D, Bergmann JH, Marioni JC, Flicek P, Spector DL. Eckersley-Maslin MA, et al. Among authors: marioni jc. Dev Cell. 2014 Feb 24;28(4):351-65. doi: 10.1016/j.devcel.2014.01.017. Dev Cell. 2014. PMID: 24576421 Free PMC article.

3

Genome-wide bisulfite sequencing in zygotes identifies demethylation targets and maps the contribution of TET3 oxidation.

Peat JR, Dean W, Clark SJ, Krueger F, Smallwood SA, Ficz G, Kim JK, Marioni JC, Hore TA, Reik W. Peat JR, et al. Among authors: marioni jc. Cell Rep. 2014 Dec 24;9(6):1990-2000. doi: 10.1016/j.celrep.2014.11.034. Epub 2014 Dec 12. Cell Rep. 2014. PMID: 25497087 Free PMC article.

4

Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation.

Kolodziejczyk AA, Kim JK, Tsang JC, Ilicic T, Henriksson J, Natarajan KN, Tuck AC, Gao X, Bühler M, Liu P, Marioni JC, Teichmann SA. Kolodziejczyk AA, et al. Among authors: marioni jc. Cell Stem Cell. 2015 Oct 1;17(4):471-85. doi: 10.1016/j.stem.2015.09.011. Cell Stem Cell. 2015. PMID: 26431182 Free PMC article.

5

Heterogeneity in Oct4 and Sox2 Targets Biases Cell Fate in 4-Cell Mouse Embryos.

Goolam M, Scialdone A, Graham SJL, Macaulay IC, Jedrusik A, Hupalowska A, Voet T, Marioni JC, Zernicka-Goetz M. Goolam M, et al. Among authors: marioni jc. Cell. 2016 Mar 24;165(1):61-74. doi: 10.1016/j.cell.2016.01.047. Cell. 2016. PMID: 27015307 Free PMC article.

6

Pooling across cells to normalize single-cell RNA sequencing data with many zero counts.

Lun AT, Bach K, Marioni JC. Lun AT, et al. Among authors: marioni jc. Genome Biol. 2016 Apr 27;17:75. doi: 10.1186/s13059-016-0947-7. Genome Biol. 2016. PMID: 27122128 Free PMC article.

7

A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor.

Lun AT, McCarthy DJ, Marioni JC. Lun AT, et al. Among authors: marioni jc. F1000Res. 2016 Aug 31;5:2122. doi: 10.12688/f1000research.9501.2. eCollection 2016. F1000Res. 2016. PMID: 27909575 Free PMC article.

8

Overcoming confounding plate effects in differential expression analyses of single-cell RNA-seq data.

Lun ATL, Marioni JC. Lun ATL, et al. Among authors: marioni jc. Biostatistics. 2017 Jul 1;18(3):451-464. doi: 10.1093/biostatistics/kxw055. Biostatistics. 2017. PMID: 28334062 Free PMC article.

9

Testing for differential abundance in mass cytometry data.

Lun ATL, Richard AC, Marioni JC. Lun ATL, et al. Among authors: marioni jc. Nat Methods. 2017 Jul;14(7):707-709. doi: 10.1038/nmeth.4295. Epub 2017 May 15. Nat Methods. 2017. PMID: 28504682 Free PMC article.

10

Assessing the reliability of spike-in normalization for analyses of single-cell RNA sequencing data.

Lun ATL, Calero-Nieto FJ, Haim-Vilmovsky L, Göttgens B, Marioni JC. Lun ATL, et al. Among authors: marioni jc. Genome Res. 2017 Nov;27(11):1795-1806. doi: 10.1101/gr.222877.117. Epub 2017 Oct 13. Genome Res. 2017. PMID: 29030468 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

188 results

Search Page

Filters