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Mapping genome-wide transcription-factor binding sites using DAP-seq.
Bartlett A, O'Malley RC, Huang SC, Galli M, Nery JR, Gallavotti A, Ecker JR. Bartlett A, et al. Among authors: ecker jr. Nat Protoc. 2017 Aug;12(8):1659-1672. doi: 10.1038/nprot.2017.055. Epub 2017 Jul 20. Nat Protoc. 2017. PMID: 28726847 Free PMC article.
Human DNA methylomes at base resolution show widespread epigenomic differences.
Lister R, Pelizzola M, Dowen RH, Hawkins RD, Hon G, Tonti-Filippini J, Nery JR, Lee L, Ye Z, Ngo QM, Edsall L, Antosiewicz-Bourget J, Stewart R, Ruotti V, Millar AH, Thomson JA, Ren B, Ecker JR. Lister R, et al. Among authors: ecker jr. Nature. 2009 Nov 19;462(7271):315-22. doi: 10.1038/nature08514. Epub 2009 Oct 14. Nature. 2009. PMID: 19829295 Free PMC article.
Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells.
Lister R, Pelizzola M, Kida YS, Hawkins RD, Nery JR, Hon G, Antosiewicz-Bourget J, O'Malley R, Castanon R, Klugman S, Downes M, Yu R, Stewart R, Ren B, Thomson JA, Evans RM, Ecker JR. Lister R, et al. Among authors: ecker jr. Nature. 2011 Mar 3;471(7336):68-73. doi: 10.1038/nature09798. Epub 2011 Feb 2. Nature. 2011. PMID: 21289626 Free PMC article.
Widespread dynamic DNA methylation in response to biotic stress.
Dowen RH, Pelizzola M, Schmitz RJ, Lister R, Dowen JM, Nery JR, Dixon JE, Ecker JR. Dowen RH, et al. Among authors: ecker jr. Proc Natl Acad Sci U S A. 2012 Aug 7;109(32):E2183-91. doi: 10.1073/pnas.1209329109. Epub 2012 Jun 25. Proc Natl Acad Sci U S A. 2012. PMID: 22733782 Free PMC article.
Epiallelic variation in Arabidopsis thaliana.
O'Malley RC, Ecker JR. O'Malley RC, et al. Among authors: ecker jr. Cold Spring Harb Symp Quant Biol. 2012;77:135-45. doi: 10.1101/sqb.2012.77.014571. Epub 2012 Dec 5. Cold Spring Harb Symp Quant Biol. 2012. PMID: 23223383 Free PMC article. Review.
340 results