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Optimizing methods and dodging pitfalls in microbiome research.
Kim D, Hofstaedter CE, Zhao C, Mattei L, Tanes C, Clarke E, Lauder A, Sherrill-Mix S, Chehoud C, Kelsen J, Conrad M, Collman RG, Baldassano R, Bushman FD, Bittinger K. Kim D, et al. Microbiome. 2017 May 5;5(1):52. doi: 10.1186/s40168-017-0267-5. Microbiome. 2017. PMID: 28476139 Free PMC article. Review.
Multi-omic Analysis of the Interaction between Clostridioides difficile Infection and Pediatric Inflammatory Bowel Disease.
Bushman FD, Conrad M, Ren Y, Zhao C, Gu C, Petucci C, Kim MS, Abbas A, Downes KJ, Devas N, Mattei LM, Breton J, Kelsen J, Marakos S, Galgano A, Kachelries K, Erlichman J, Hart JL, Moraskie M, Kim D, Zhang H, Hofstaedter CE, Wu GD, Lewis JD, Zackular JP, Li H, Bittinger K, Baldassano R. Bushman FD, et al. Among authors: kim d, kim ms. Cell Host Microbe. 2020 Sep 9;28(3):422-433.e7. doi: 10.1016/j.chom.2020.07.020. Epub 2020 Aug 20. Cell Host Microbe. 2020. PMID: 32822584 Free PMC article.
Bacterial colonization reprograms the neonatal gut metabolome.
Bittinger K, Zhao C, Li Y, Ford E, Friedman ES, Ni J, Kulkarni CV, Cai J, Tian Y, Liu Q, Patterson AD, Sarkar D, Chan SHJ, Maranas C, Saha-Shah A, Lund P, Garcia BA, Mattei LM, Gerber JS, Elovitz MA, Kelly A, DeRusso P, Kim D, Hofstaedter CE, Goulian M, Li H, Bushman FD, Zemel BS, Wu GD. Bittinger K, et al. Among authors: kim d. Nat Microbiol. 2020 Jun;5(6):838-847. doi: 10.1038/s41564-020-0694-0. Epub 2020 Apr 13. Nat Microbiol. 2020. PMID: 32284564 Free PMC article.
Whole-Genome Sequencing To Identify Drivers of Carbapenem-Resistant Klebsiella pneumoniae Transmission within and between Regional Long-Term Acute-Care Hospitals.
Han JH, Lapp Z, Bushman F, Lautenbach E, Goldstein EJC, Mattei L, Hofstaedter CE, Kim D, Nachamkin I, Garrigan C, Jain T, Bilker W, Wolford HM, Slayton RB, Wise J, Tolomeo P, Snitkin ES. Han JH, et al. Among authors: kim d. Antimicrob Agents Chemother. 2019 Oct 22;63(11):e01622-19. doi: 10.1128/AAC.01622-19. Print 2019 Nov. Antimicrob Agents Chemother. 2019. PMID: 31451495 Free PMC article.
Inner-Bond-Cleavage Approach to Figure-Eight Macrocycles from Planar Aromatic Hydrocarbons.
Yoshina R, Hirano J, Nishimoto E, Sakamoto Y, Tajima K, Minabe S, Uyanik M, Ishihara K, Ikai T, Yashima E, Omine T, Ishiwari F, Saeki A, Kim J, Oh J, Kim D, Liu G, Yasuda T, Shinokubo H, Fukui N. Yoshina R, et al. Among authors: kim d. J Am Chem Soc. 2024 Sep 24. doi: 10.1021/jacs.4c07985. Online ahead of print. J Am Chem Soc. 2024. PMID: 39315432
Social status mediates the propagation of unfairness.
Kang H, Kim J, Kim D, Kim H. Kang H, et al. Among authors: kim d. Front Psychol. 2024 Sep 9;15:1253831. doi: 10.3389/fpsyg.2024.1253831. eCollection 2024. Front Psychol. 2024. PMID: 39315034 Free PMC article.
One-year real-world experience with mavacamten and its physiologic effects on obstructive hypertrophic cardiomyopathy.
Kim DS, Chu EL, Keamy-Minor EE, Paranjpe ID, Tang WL, O'Sullivan JW, Desai YB, Liu MB, Munsey E, Hecker K, Cuenco I, Kao B, Bacolor E, Bonnett C, Linder A, Lacar K, Robles N, Lamendola C, Smith A, Knowles JW, Perez MV, Kawana M, Sallam KI, Weldy CS, Wheeler MT, Parikh VN, Salisbury H, Ashley EA; Stanford Center for Inherited Cardiovascular Disease. Kim DS, et al. Front Cardiovasc Med. 2024 Aug 30;11:1429230. doi: 10.3389/fcvm.2024.1429230. eCollection 2024. Front Cardiovasc Med. 2024. PMID: 39314763 Free PMC article.
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