Shi T - Search Results

1

Acidic domains differentially read histone H3 lysine 4 methylation status and are widely present in chromatin-associated proteins.

Wu M, Wei W, Chen J, Cong R, Shi T, Bouvet P, Li J, Wong J, Du JX. Wu M, et al. Among authors: shi t. Sci China Life Sci. 2017 Feb;60(2):138-151. doi: 10.1007/s11427-016-0413-3. Epub 2017 Feb 13. Sci China Life Sci. 2017. PMID: 28194553

2

Overview of available methods for diverse RNA-Seq data analyses.

Chen G, Wang C, Shi T. Chen G, et al. Among authors: shi t. Sci China Life Sci. 2011 Dec;54(12):1121-8. doi: 10.1007/s11427-011-4255-x. Epub 2012 Jan 7. Sci China Life Sci. 2011. PMID: 22227904 Review.

3

De novo transcriptome assembly of RNA-Seq reads with different strategies.

Chen G, Yin K, Wang C, Shi T. Chen G, et al. Among authors: shi t. Sci China Life Sci. 2011 Dec;54(12):1129-33. doi: 10.1007/s11427-011-4256-9. Epub 2012 Jan 7. Sci China Life Sci. 2011. PMID: 22227905

4

Comparative study of de novo assembly and genome-guided assembly strategies for transcriptome reconstruction based on RNA-Seq.

Lu B, Zeng Z, Shi T. Lu B, et al. Among authors: shi t. Sci China Life Sci. 2013 Feb;56(2):143-55. doi: 10.1007/s11427-013-4442-z. Epub 2013 Feb 8. Sci China Life Sci. 2013. PMID: 23393030 Free article.

5

Incorporating the human gene annotations in different databases significantly improved transcriptomic and genetic analyses.

Chen G, Wang C, Shi L, Qu X, Chen J, Yang J, Shi C, Chen L, Zhou P, Ning B, Tong W, Shi T. Chen G, et al. Among authors: shi c, shi l, shi t. RNA. 2013 Apr;19(4):479-89. doi: 10.1261/rna.037473.112. Epub 2013 Feb 19. RNA. 2013. PMID: 23431329 Free PMC article.

6

Comprehensively identifying and characterizing the missing gene sequences in human reference genome with integrated analytic approaches.

Chen G, Wang C, Shi L, Tong W, Qu X, Chen J, Yang J, Shi C, Chen L, Zhou P, Lu B, Shi T. Chen G, et al. Among authors: shi c, shi l, shi t. Hum Genet. 2013 Aug;132(8):899-911. doi: 10.1007/s00439-013-1300-9. Epub 2013 Apr 10. Hum Genet. 2013. PMID: 23572138

7

Dissecting the Characteristics and Dynamics of Human Protein Complexes at Transcriptome Cascade Using RNA-Seq Data.

Chen G, Chen J, Shi C, Shi L, Tong W, Shi T. Chen G, et al. Among authors: shi c, shi l, shi t. PLoS One. 2013 Jun 18;8(6):e66521. doi: 10.1371/journal.pone.0066521. Print 2013. PLoS One. 2013. PMID: 23824284 Free PMC article.

8

Re-annotation of presumed noncoding disease/trait-associated genetic variants by integrative analyses.

Chen G, Yu D, Chen J, Cao R, Yang J, Wang H, Ji X, Ning B, Shi T. Chen G, et al. Among authors: shi t. Sci Rep. 2015 Mar 30;5:9453. doi: 10.1038/srep09453. Sci Rep. 2015. PMID: 25819875 Free PMC article.

9

Non-germ Line Restoration of Genomic Imprinting for a Small Subset of Imprinted Genes in Ubiquitin-like PHD and RING Finger Domain-Containing 1 (Uhrf1) Null Mouse Embryonic Stem Cells.

Qi S, Wang Z, Li P, Wu Q, Shi T, Li J, Wong J. Qi S, et al. Among authors: shi t. J Biol Chem. 2015 May 29;290(22):14181-91. doi: 10.1074/jbc.M114.626697. Epub 2015 Apr 21. J Biol Chem. 2015. PMID: 25900245 Free PMC article.

10

Multidimensional Proteomics Reveals a Role of UHRF2 in the Regulation of Epithelial-Mesenchymal Transition (EMT).

Lai M, Liang L, Chen J, Qiu N, Ge S, Ji S, Shi T, Zhen B, Liu M, Ding C, Wang Y, Qin J. Lai M, et al. Among authors: shi t. Mol Cell Proteomics. 2016 Jul;15(7):2263-78. doi: 10.1074/mcp.M115.057448. Epub 2016 Apr 25. Mol Cell Proteomics. 2016. PMID: 27114453 Free PMC article.

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