Nielsen HB - Search Results

1

Transcriptional interactions suggest niche segregation among microorganisms in the human gut.

Plichta DR, Juncker AS, Bertalan M, Rettedal E, Gautier L, Varela E, Manichanh C, Fouqueray C, Levenez F, Nielsen T, Doré J, Machado AM, de Evgrafov MC, Hansen T, Jørgensen T, Bork P, Guarner F, Pedersen O; Metagenomics of the Human Intestinal Tract (MetaHIT) Consortium; Sommer MO, Ehrlich SD, Sicheritz-Pontén T, Brunak S, Nielsen HB. Plichta DR, et al. Among authors: nielsen hb, nielsen t. Nat Microbiol. 2016 Aug 26;1(11):16152. doi: 10.1038/nmicrobiol.2016.152. Nat Microbiol. 2016. PMID: 27564131

2

Nielsen H, Engelbrecht J, von Heijne G, Brunak S. Nielsen H, et al. Proteins. 1996 Feb;24(2):165-77. doi: 10.1002/(SICI)1097-0134(199602)24:2<165::AID-PROT4>3.0.CO;2-I. Proteins. 1996. PMID: 8820484

3

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.

Nielsen H, Engelbrecht J, Brunak S, von Heijne G. Nielsen H, et al. Protein Eng. 1997 Jan;10(1):1-6. doi: 10.1093/protein/10.1.1. Protein Eng. 1997. PMID: 9051728 Free article.

4

Machine learning approaches for the prediction of signal peptides and other protein sorting signals.

Nielsen H, Brunak S, von Heijne G. Nielsen H, et al. Protein Eng. 1999 Jan;12(1):3-9. doi: 10.1093/protein/12.1.3. Protein Eng. 1999. PMID: 10065704 Review.

5

A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.

Nielsen H, Engelbrecht J, Brunak S, von Heijne G. Nielsen H, et al. Int J Neural Syst. 1997 Oct-Dec;8(5-6):581-99. doi: 10.1142/s0129065797000537. Int J Neural Syst. 1997. PMID: 10065837

6

Helicobacter felis does not stimulate human neutrophil oxidative burst in contrast to 'Gastrospirillum hominis' and Helicobacter pylori.

Hansen TK, Hansen PS, Nørgaard A, Nielsen H, Lee A, Andersen LP. Hansen TK, et al. FEMS Immunol Med Microbiol. 2001 Apr;30(3):187-95. doi: 10.1111/j.1574-695X.2001.tb01569.x. FEMS Immunol Med Microbiol. 2001. PMID: 11335137 Free article.

7

Prediction of lipoprotein signal peptides in Gram-negative bacteria.

Juncker AS, Willenbrock H, Von Heijne G, Brunak S, Nielsen H, Krogh A. Juncker AS, et al. Protein Sci. 2003 Aug;12(8):1652-62. doi: 10.1110/ps.0303703. Protein Sci. 2003. PMID: 12876315 Free PMC article.

8

Blood cell gene expression profiling in rheumatoid arthritis. Discriminative genes and effect of rheumatoid factor.

Bovin LF, Rieneck K, Workman C, Nielsen H, Sørensen SF, Skjødt H, Florescu A, Brunak S, Bendtzen K. Bovin LF, et al. Immunol Lett. 2004 May 15;93(2-3):217-26. doi: 10.1016/j.imlet.2004.03.018. Immunol Lett. 2004. PMID: 15158620

9

Improved prediction of signal peptides: SignalP 3.0.

Bendtsen JD, Nielsen H, von Heijne G, Brunak S. Bendtsen JD, et al. J Mol Biol. 2004 Jul 16;340(4):783-95. doi: 10.1016/j.jmb.2004.05.028. J Mol Biol. 2004. PMID: 15223320

10

Prediction of twin-arginine signal peptides.

Bendtsen JD, Nielsen H, Widdick D, Palmer T, Brunak S. Bendtsen JD, et al. BMC Bioinformatics. 2005 Jul 2;6:167. doi: 10.1186/1471-2105-6-167. BMC Bioinformatics. 2005. PMID: 15992409 Free PMC article.

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