Basile AO - Search Results

1

Phenome-Wide Association Study to Explore Relationships between Immune System Related Genetic Loci and Complex Traits and Diseases.

Verma A, Basile AO, Bradford Y, Kuivaniemi H, Tromp G, Carey D, Gerhard GS, Crowe JE Jr, Ritchie MD, Pendergrass SA. Verma A, et al. Among authors: basile ao. PLoS One. 2016 Aug 10;11(8):e0160573. doi: 10.1371/journal.pone.0160573. eCollection 2016. PLoS One. 2016. PMID: 27508393 Free PMC article.

2

Informatics and machine learning to define the phenotype.

Basile AO, Ritchie MD. Basile AO, et al. Expert Rev Mol Diagn. 2018 Mar;18(3):219-226. doi: 10.1080/14737159.2018.1439380. Epub 2018 Feb 16. Expert Rev Mol Diagn. 2018. PMID: 29431517 Free PMC article. Review.

3

PLATO software provides analytic framework for investigating complexity beyond genome-wide association studies.

Hall MA, Wallace J, Lucas A, Kim D, Basile AO, Verma SS, McCarty CA, Brilliant MH, Peissig PL, Kitchner TE, Verma A, Pendergrass SA, Dudek SM, Moore JH, Ritchie MD. Hall MA, et al. Among authors: basile ao. Nat Commun. 2017 Oct 27;8(1):1167. doi: 10.1038/s41467-017-00802-2. Nat Commun. 2017. PMID: 29079728 Free PMC article.

4

Real world scenarios in rare variant association analysis: the impact of imbalance and sample size on the power in silico.

Zhang X, Basile AO, Pendergrass SA, Ritchie MD. Zhang X, et al. Among authors: basile ao. BMC Bioinformatics. 2019 Jan 22;20(1):46. doi: 10.1186/s12859-018-2591-6. BMC Bioinformatics. 2019. PMID: 30669967 Free PMC article.

5

A Polygenic and Phenotypic Risk Prediction for Polycystic Ovary Syndrome Evaluated by Phenome-Wide Association Studies.

Joo YY, Actkins K, Pacheco JA, Basile AO, Carroll R, Crosslin DR, Day F, Denny JC, Velez Edwards DR, Hakonarson H, Harley JB, Hebbring SJ, Ho K, Jarvik GP, Jones M, Karaderi T, Mentch FD, Meun C, Namjou B, Pendergrass S, Ritchie MD, Stanaway IB, Urbanek M, Walunas TL, Smith M, Chisholm RL, Kho AN, Davis L, Hayes MG; International PCOS Consortium. Joo YY, et al. Among authors: basile ao. J Clin Endocrinol Metab. 2020 Jun 1;105(6):1918-36. doi: 10.1210/clinem/dgz326. J Clin Endocrinol Metab. 2020. PMID: 31917831 Free PMC article.

6

Novel features and enhancements in BioBin, a tool for the biologically inspired binning and association analysis of rare variants.

Basile AO, Byrska-Bishop M, Wallace J, Frase AT, Ritchie MD. Basile AO, et al. Bioinformatics. 2018 Feb 1;34(3):527-529. doi: 10.1093/bioinformatics/btx559. Bioinformatics. 2018. PMID: 28968757 Free PMC article.

7

KNOWLEDGE DRIVEN BINNING AND PHEWAS ANALYSIS IN MARSHFIELD PERSONALIZED MEDICINE RESEARCH PROJECT USING BIOBIN.

Basile AO, Wallace JR, Peissig P, McCarty CA, Brilliant M, Ritchie MD. Basile AO, et al. Pac Symp Biocomput. 2016;21:249-60. Pac Symp Biocomput. 2016. PMID: 26776191 Free PMC article.

8

A biologically informed method for detecting rare variant associations.

Moore CCB, Basile AO, Wallace JR, Frase AT, Ritchie MD. Moore CCB, et al. Among authors: basile ao. BioData Min. 2016 Aug 30;9(1):27. doi: 10.1186/s13040-016-0107-3. eCollection 2016. BioData Min. 2016. PMID: 27582876 Free PMC article.

9

Knowledge-driven binning approach for rare variant association analysis: application to neuroimaging biomarkers in Alzheimer's disease.

Kim D, Basile AO, Bang L, Horgusluoglu E, Lee S, Ritchie MD, Saykin AJ, Nho K. Kim D, et al. Among authors: basile ao. BMC Med Inform Decis Mak. 2017 May 18;17(Suppl 1):61. doi: 10.1186/s12911-017-0454-0. BMC Med Inform Decis Mak. 2017. PMID: 28539126 Free PMC article.

10

PATTERNS IN BIOMEDICAL DATA-HOW DO WE FIND THEM?

Basile AO, Verma A, Byrska-Bishop M, Pendergrass SA, Darabos C, Lester Kirchner H. Basile AO, et al. Pac Symp Biocomput. 2017;22:177-183. doi: 10.1142/9789813207813_0018. Pac Symp Biocomput. 2017. PMID: 27896973 Free article.

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