Schudoma C - Search Results

1

Endogenous Arabidopsis messenger RNAs transported to distant tissues.

Thieme CJ, Rojas-Triana M, Stecyk E, Schudoma C, Zhang W, Yang L, Miñambres M, Walther D, Schulze WX, Paz-Ares J, Scheible WR, Kragler F. Thieme CJ, et al. Among authors: schudoma c. Nat Plants. 2015 Mar 23;1(4):15025. doi: 10.1038/nplants.2015.25. Nat Plants. 2015. PMID: 27247031

2

Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins.

Durek P, Schudoma C, Weckwerth W, Selbig J, Walther D. Durek P, et al. Among authors: schudoma c. BMC Bioinformatics. 2009 Apr 21;10:117. doi: 10.1186/1471-2105-10-117. BMC Bioinformatics. 2009. PMID: 19383128 Free PMC article.

3

Sequence-structure relationships in RNA loops: establishing the basis for loop homology modeling.

Schudoma C, May P, Nikiforova V, Walther D. Schudoma C, et al. Nucleic Acids Res. 2010 Jan;38(3):970-80. doi: 10.1093/nar/gkp1010. Epub 2009 Nov 18. Nucleic Acids Res. 2010. PMID: 19923230 Free PMC article.

4

Modeling RNA loops using sequence homology and geometric constraints.

Schudoma C, May P, Walther D. Schudoma C, et al. Bioinformatics. 2010 Jul 1;26(13):1671-2. doi: 10.1093/bioinformatics/btq236. Epub 2010 Apr 28. Bioinformatics. 2010. PMID: 20427516 Free PMC article.

5

The influence of the local sequence environment on RNA loop structures.

Schudoma C, Larhlimi A, Walther D. Schudoma C, et al. RNA. 2011 Jul;17(7):1247-57. doi: 10.1261/rna.2550211. Epub 2011 May 31. RNA. 2011. PMID: 21628431 Free PMC article.

6

Conducting molecular biomarker discovery studies in plants.

Schudoma C, Steinfath M, Sprenger H, van Dongen JT, Hincha D, Zuther E, Geigenberger P, Kopka J, Köhl K, Walther D. Schudoma C, et al. Methods Mol Biol. 2012;918:127-50. doi: 10.1007/978-1-61779-995-2_10. Methods Mol Biol. 2012. PMID: 22893290 Review.

7

Give It AGO: The Search for miRNA-Argonaute Sorting Signals in Arabidopsis thaliana Indicates a Relevance of Sequence Positions Other than the 5'-Position Alone.

Thieme CJ, Schudoma C, May P, Walther D. Thieme CJ, et al. Among authors: schudoma c. Front Plant Sci. 2012 Dec 7;3:272. doi: 10.3389/fpls.2012.00272. eCollection 2012. Front Plant Sci. 2012. PMID: 23233858 Free PMC article.

8

A bioinformatics approach to distinguish plant parasite and host transcriptomes in interface tissue by classifying RNA-Seq reads.

Ikeue D, Schudoma C, Zhang W, Ogata Y, Sakamoto T, Kurata T, Furuhashi T, Kragler F, Aoki K. Ikeue D, et al. Among authors: schudoma c. Plant Methods. 2015 May 3;11:34. doi: 10.1186/s13007-015-0066-6. eCollection 2015. Plant Methods. 2015. PMID: 26052341 Free PMC article.

9

Corrigendum: Endogenous Arabidopsis messenger RNAs transported to distant tissues.

Thieme CJ, Rojas-Triana M, Stecyk E, Schudoma C, Zhang W, Yang L, Miñambres M, Walther D, Schulze WX, Paz-Ares J, Scheible WR, Kragler F. Thieme CJ, et al. Among authors: schudoma c. Nat Plants. 2016 Nov 21;2:16195. doi: 10.1038/nplants.2016.195. Nat Plants. 2016. PMID: 27869791 No abstract available.

10

Assessment of drought tolerance and its potential yield penalty in potato.

Sprenger H, Rudack K, Schudoma C, Neumann A, Seddig S, Peters R, Zuther E, Kopka J, Hincha DK, Walther D, Köhl K. Sprenger H, et al. Among authors: schudoma c. Funct Plant Biol. 2015 Jun;42(7):655-667. doi: 10.1071/FP15013. Funct Plant Biol. 2015. PMID: 32480709

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