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Genetic and environmental influences interact with age and sex in shaping the human methylome.
van Dongen J, Nivard MG, Willemsen G, Hottenga JJ, Helmer Q, Dolan CV, Ehli EA, Davies GE, van Iterson M, Breeze CE, Beck S; BIOS Consortium; Suchiman HE, Jansen R, van Meurs JB, Heijmans BT, Slagboom PE, Boomsma DI. van Dongen J, et al. Among authors: breeze ce. Nat Commun. 2016 Apr 7;7:11115. doi: 10.1038/ncomms11115. Nat Commun. 2016. PMID: 27051996 Free PMC article.
eFORGE: A Tool for Identifying Cell Type-Specific Signal in Epigenomic Data.
Breeze CE, Paul DS, van Dongen J, Butcher LM, Ambrose JC, Barrett JE, Lowe R, Rakyan VK, Iotchkova V, Frontini M, Downes K, Ouwehand WH, Laperle J, Jacques PÉ, Bourque G, Bergmann AK, Siebert R, Vellenga E, Saeed S, Matarese F, Martens JHA, Stunnenberg HG, Teschendorff AE, Herrero J, Birney E, Dunham I, Beck S. Breeze CE, et al. Cell Rep. 2016 Nov 15;17(8):2137-2150. doi: 10.1016/j.celrep.2016.10.059. Cell Rep. 2016. PMID: 27851974 Free PMC article.
Genome-wide analysis of DNA methylation in buccal cells: a study of monozygotic twins and mQTLs.
van Dongen J, Ehli EA, Jansen R, van Beijsterveldt CEM, Willemsen G, Hottenga JJ, Kallsen NA, Peyton SA, Breeze CE, Kluft C, Heijmans BT, Bartels M, Davies GE, Boomsma DI. van Dongen J, et al. Among authors: breeze ce. Epigenetics Chromatin. 2018 Sep 25;11(1):54. doi: 10.1186/s13072-018-0225-x. Epigenetics Chromatin. 2018. PMID: 30253792 Free PMC article.
eFORGE v2.0: updated analysis of cell type-specific signal in epigenomic data.
Breeze CE, Reynolds AP, van Dongen J, Dunham I, Lazar J, Neph S, Vierstra J, Bourque G, Teschendorff AE, Stamatoyannopoulos JA, Beck S. Breeze CE, et al. Bioinformatics. 2019 Nov 1;35(22):4767-4769. doi: 10.1093/bioinformatics/btz456. Bioinformatics. 2019. PMID: 31161210 Free PMC article.
57 results