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PSAMM: A Portable System for the Analysis of Metabolic Models.
PLoS Comput Biol. 2016 Feb 1;12(2):e1004732. doi: 10.1371/journal.pcbi.1004732. eCollection 2016 Feb.
PLoS Comput Biol. 2016.
PMID: 26828591
Free PMC article.
Using PSAMM for the Curation and Analysis of Genome-Scale Metabolic Models.
Dufault-Thompson K, Steffensen JL, Zhang Y.
Dufault-Thompson K, et al. Among authors: steffensen jl.
Methods Mol Biol. 2018;1716:131-150. doi: 10.1007/978-1-4939-7528-0_6.
Methods Mol Biol. 2018.
PMID: 29222752
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FindPrimaryPairs: An efficient algorithm for predicting element-transferring reactant/product pairs in metabolic networks.
Steffensen JL, Dufault-Thompson K, Zhang Y.
Steffensen JL, et al.
PLoS One. 2018 Feb 15;13(2):e0192891. doi: 10.1371/journal.pone.0192891. eCollection 2018.
PLoS One. 2018.
PMID: 29447218
Free PMC article.
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A Simple In Vitro Gut Model for Studying the Interaction between Escherichia coli and the Intestinal Commensal Microbiota in Cecal Mucus.
Mokszycki ME, Leatham-Jensen M, Steffensen JL, Zhang Y, Krogfelt KA, Caldwell ME, Conway T, Cohen PS.
Mokszycki ME, et al. Among authors: steffensen jl.
Appl Environ Microbiol. 2018 Nov 30;84(24):e02166-18. doi: 10.1128/AEM.02166-18. Print 2018 Dec 15.
Appl Environ Microbiol. 2018.
PMID: 30291119
Free PMC article.
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