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Page 1
Probe Design Strategies for Oligonucleotide Microarrays.
Parisot N, Peyretaillade E, Dugat-Bony E, Denonfoux J, Mahul A, Peyret P. Parisot N, et al. Among authors: denonfoux j. Methods Mol Biol. 2016;1368:67-82. doi: 10.1007/978-1-4939-3136-1_6. Methods Mol Biol. 2016. PMID: 26614069
Large scale explorative oligonucleotide probe selection for thousands of genetic groups on a computing grid: application to phylogenetic probe design using a curated small subunit ribosomal RNA gene database.
Jaziri F, Peyretaillade E, Missaoui M, Parisot N, Cipière S, Denonfoux J, Mahul A, Peyret P, Hill DR. Jaziri F, et al. Among authors: denonfoux j. ScientificWorldJournal. 2014 Jan 6;2014:350487. doi: 10.1155/2014/350487. eCollection 2014. ScientificWorldJournal. 2014. PMID: 24516366 Free PMC article.
PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification.
Jaziri F, Parisot N, Abid A, Denonfoux J, Ribière C, Gasc C, Boucher D, Brugère JF, Mahul A, Hill DR, Peyretaillade E, Peyret P. Jaziri F, et al. Among authors: denonfoux j. Database (Oxford). 2014 Apr 26;2014(0):bau036. doi: 10.1093/database/bau036. Print 2014. Database (Oxford). 2014. PMID: 24771669 Free PMC article.
The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family level.
Tottey W, Denonfoux J, Jaziri F, Parisot N, Missaoui M, Hill D, Borrel G, Peyretaillade E, Alric M, Harris HM, Jeffery IB, Claesson MJ, O'Toole PW, Peyret P, Brugère JF. Tottey W, et al. Among authors: denonfoux j. PLoS One. 2013 May 17;8(5):e62544. doi: 10.1371/journal.pone.0062544. Print 2013. PLoS One. 2013. PMID: 23690942 Free PMC article.
Distribution of Dehalococcoidia in the Anaerobic Deep Water of a Remote Meromictic Crater Lake and Detection of Dehalococcoidia-Derived Reductive Dehalogenase Homologous Genes.
Biderre-Petit C, Dugat-Bony E, Mege M, Parisot N, Adrian L, Moné A, Denonfoux J, Peyretaillade E, Debroas D, Boucher D, Peyret P. Biderre-Petit C, et al. Among authors: denonfoux j. PLoS One. 2016 Jan 6;11(1):e0145558. doi: 10.1371/journal.pone.0145558. eCollection 2016. PLoS One. 2016. PMID: 26734727 Free PMC article.
Annotation of microsporidian genomes using transcriptional signals.
Peyretaillade E, Parisot N, Polonais V, Terrat S, Denonfoux J, Dugat-Bony E, Wawrzyniak I, Biderre-Petit C, Mahul A, Rimour S, Gonçalves O, Bornes S, Delbac F, Chebance B, Duprat S, Samson G, Katinka M, Weissenbach J, Wincker P, Peyret P. Peyretaillade E, et al. Among authors: denonfoux j. Nat Commun. 2012;3:1137. doi: 10.1038/ncomms2156. Nat Commun. 2012. PMID: 23072807 Free article.
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