Parker JS - Search Results

1

Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma.

Cancer Genome Atlas Research Network; Linehan WM, Spellman PT, Ricketts CJ, Creighton CJ, Fei SS, Davis C, Wheeler DA, Murray BA, Schmidt L, Vocke CD, Peto M, Al Mamun AA, Shinbrot E, Sethi A, Brooks S, Rathmell WK, Brooks AN, Hoadley KA, Robertson AG, Brooks D, Bowlby R, Sadeghi S, Shen H, Weisenberger DJ, Bootwalla M, Baylin SB, Laird PW, Cherniack AD, Saksena G, Haake S, Li J, Liang H, Lu Y, Mills GB, Akbani R, Leiserson MD, Raphael BJ, Anur P, Bottaro D, Albiges L, Barnabas N, Choueiri TK, Czerniak B, Godwin AK, Hakimi AA, Ho TH, Hsieh J, Ittmann M, Kim WY, Krishnan B, Merino MJ, Mills Shaw KR, Reuter VE, Reznik E, Shelley CS, Shuch B, Signoretti S, Srinivasan R, Tamboli P, Thomas G, Tickoo S, Burnett K, Crain D, Gardner J, Lau K, Mallery D, Morris S, Paulauskis JD, Penny RJ, Shelton C, Shelton WT, Sherman M, Thompson E, Yena P, Avedon MT, Bowen J, Gastier-Foster JM, Gerken M, Leraas KM, Lichtenberg TM, Ramirez NC, Santos T, Wise L, Zmuda E, Demchok JA, Felau I, Hutter CM, Sheth M, Sofia HJ, Tarnuzzer R, Wang Z, Yang L, Zenklusen JC, Zhang J, Ayala B, Baboud J, Chudamani S, Liu J, Lolla L, Naresh R, Pihl T, Sun Q, Wan Y, Wu Y, Ally A, Balasundaram M, Balu S, Beroukhim R, Boden… See abstract for full author list ➔ Cancer Genome Atlas Research Network, et al. Among authors: parker js. N Engl J Med. 2016 Jan 14;374(2):135-45. doi: 10.1056/NEJMoa1505917. Epub 2015 Nov 4. N Engl J Med. 2016. PMID: 26536169 Free PMC article.

2

Adjustment of systematic microarray data biases.

Benito M, Parker J, Du Q, Wu J, Xiang D, Perou CM, Marron JS. Benito M, et al. Among authors: parker j. Bioinformatics. 2004 Jan 1;20(1):105-14. doi: 10.1093/bioinformatics/btg385. Bioinformatics. 2004. PMID: 14693816

3

Molecular classification of head and neck squamous cell carcinomas using patterns of gene expression.

Chung CH, Parker JS, Karaca G, Wu J, Funkhouser WK, Moore D, Butterfoss D, Xiang D, Zanation A, Yin X, Shockley WW, Weissler MC, Dressler LG, Shores CG, Yarbrough WG, Perou CM. Chung CH, et al. Among authors: parker js. Cancer Cell. 2004 May;5(5):489-500. doi: 10.1016/s1535-6108(04)00112-6. Cancer Cell. 2004. PMID: 15144956 Free article.

4

Prediction of toxicant-specific gene expression signatures after chemotherapeutic treatment of breast cell lines.

Troester MA, Hoadley KA, Parker JS, Perou CM. Troester MA, et al. Among authors: parker js. Environ Health Perspect. 2004 Nov;112(16):1607-13. doi: 10.1289/txg.7204. Environ Health Perspect. 2004. PMID: 15598611 Free PMC article.

5

A custom microarray platform for analysis of microRNA gene expression.

Thomson JM, Parker J, Perou CM, Hammond SM. Thomson JM, et al. Nat Methods. 2004 Oct;1(1):47-53. doi: 10.1038/nmeth704. Epub 2004 Sep 29. Nat Methods. 2004. PMID: 15782152

6

An integration of complementary strategies for gene-expression analysis to reveal novel therapeutic opportunities for breast cancer.

Bild AH, Parker JS, Gustafson AM, Acharya CR, Hoadley KA, Anders C, Marcom PK, Carey LA, Potti A, Nevins JR, Perou CM. Bild AH, et al. Among authors: parker js. Breast Cancer Res. 2009;11(4):R55. doi: 10.1186/bcr2344. Epub 2009 Jul 28. Breast Cancer Res. 2009. PMID: 19638211 Free PMC article.

7

Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer.

Prat A, Parker JS, Karginova O, Fan C, Livasy C, Herschkowitz JI, He X, Perou CM. Prat A, et al. Among authors: parker js. Breast Cancer Res. 2010;12(5):R68. doi: 10.1186/bcr2635. Epub 2010 Sep 2. Breast Cancer Res. 2010. PMID: 20813035 Free PMC article.

8

Potential tumor suppressor role for the c-Myb oncogene in luminal breast cancer.

Thorner AR, Parker JS, Hoadley KA, Perou CM. Thorner AR, et al. Among authors: parker js. PLoS One. 2010 Oct 7;5(10):e13073. doi: 10.1371/journal.pone.0013073. PLoS One. 2010. PMID: 20949095 Free PMC article.

9

Building prognostic models for breast cancer patients using clinical variables and hundreds of gene expression signatures.

Fan C, Prat A, Parker JS, Liu Y, Carey LA, Troester MA, Perou CM. Fan C, et al. Among authors: parker js. BMC Med Genomics. 2011 Jan 9;4:3. doi: 10.1186/1755-8794-4-3. BMC Med Genomics. 2011. PMID: 21214954 Free PMC article.

10

Comprehensive molecular portraits of human breast tumours.

Cancer Genome Atlas Network. Cancer Genome Atlas Network. Nature. 2012 Oct 4;490(7418):61-70. doi: 10.1038/nature11412. Epub 2012 Sep 23. Nature. 2012. PMID: 23000897 Free PMC article.

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