Madsen JG - Search Results

1

Acute TNF-induced repression of cell identity genes is mediated by NFκB-directed redistribution of cofactors from super-enhancers.

Schmidt SF, Larsen BD, Loft A, Nielsen R, Madsen JG, Mandrup S. Schmidt SF, et al. Among authors: madsen jg. Genome Res. 2015 Sep;25(9):1281-94. doi: 10.1101/gr.188300.114. Epub 2015 Jun 25. Genome Res. 2015. PMID: 26113076 Free PMC article.

2

Browning of human adipocytes requires KLF11 and reprogramming of PPARγ superenhancers.

Loft A, Forss I, Siersbæk MS, Schmidt SF, Larsen AS, Madsen JG, Pisani DF, Nielsen R, Aagaard MM, Mathison A, Neville MJ, Urrutia R, Karpe F, Amri EZ, Mandrup S. Loft A, et al. Among authors: madsen jg. Genes Dev. 2015 Jan 1;29(1):7-22. doi: 10.1101/gad.250829.114. Epub 2014 Dec 12. Genes Dev. 2015. PMID: 25504365 Free PMC article.

3

iRNA-seq: computational method for genome-wide assessment of acute transcriptional regulation from total RNA-seq data.

Madsen JG, Schmidt SF, Larsen BD, Loft A, Nielsen R, Mandrup S. Madsen JG, et al. Nucleic Acids Res. 2015 Mar 31;43(6):e40. doi: 10.1093/nar/gku1365. Epub 2015 Jan 6. Nucleic Acids Res. 2015. PMID: 25564527 Free PMC article.

4

RNA-Seq and Mass-Spectrometry-Based Lipidomics Reveal Extensive Changes of Glycerolipid Pathways in Brown Adipose Tissue in Response to Cold.

Marcher AB, Loft A, Nielsen R, Vihervaara T, Madsen JG, Sysi-Aho M, Ekroos K, Mandrup S. Marcher AB, et al. Among authors: madsen jg. Cell Rep. 2015 Dec 1;13(9):2000-13. doi: 10.1016/j.celrep.2015.10.069. Epub 2015 Nov 25. Cell Rep. 2015. PMID: 26628366 Free article.

5

Integrative Genomics Outlines a Biphasic Glucose Response and a ChREBP-RORγ Axis Regulating Proliferation in β Cells.

Schmidt SF, Madsen JG, Frafjord KØ, Poulsen Ll, Salö S, Boergesen M, Loft A, Larsen BD, Madsen MS, Holst JJ, Maechler P, Dalgaard LT, Mandrup S. Schmidt SF, et al. Among authors: madsen jg, madsen ms. Cell Rep. 2016 Aug 30;16(9):2359-72. doi: 10.1016/j.celrep.2016.07.063. Epub 2016 Aug 18. Cell Rep. 2016. PMID: 27545881 Free article.

6

Dynamic Rewiring of Promoter-Anchored Chromatin Loops during Adipocyte Differentiation.

Siersbæk R, Madsen JGS, Javierre BM, Nielsen R, Bagge EK, Cairns J, Wingett SW, Traynor S, Spivakov M, Fraser P, Mandrup S. Siersbæk R, et al. Mol Cell. 2017 May 4;66(3):420-435.e5. doi: 10.1016/j.molcel.2017.04.010. Mol Cell. 2017. PMID: 28475875 Free article.

7

Integrated analysis of motif activity and gene expression changes of transcription factors.

Madsen JGS, Rauch A, Van Hauwaert EL, Schmidt SF, Winnefeld M, Mandrup S. Madsen JGS, et al. Genome Res. 2018 Feb;28(2):243-255. doi: 10.1101/gr.227231.117. Epub 2017 Dec 12. Genome Res. 2018. PMID: 29233921 Free PMC article.

8

AMPK Profiling in Rodent and Human Pancreatic Beta-Cells under Nutrient-Rich Metabolic Stress.

Brun T, Jiménez-Sánchez C, Madsen JGS, Hadadi N, Duhamel D, Bartley C, Oberhauser L, Trajkovski M, Mandrup S, Maechler P. Brun T, et al. Int J Mol Sci. 2020 Jun 1;21(11):3982. doi: 10.3390/ijms21113982. Int J Mol Sci. 2020. PMID: 32492936 Free PMC article.

9

Plasticity of Epididymal Adipose Tissue in Response to Diet-Induced Obesity at Single-Nucleus Resolution.

Sárvári AK, Van Hauwaert EL, Markussen LK, Gammelmark E, Marcher AB, Ebbesen MF, Nielsen R, Brewer JR, Madsen JGS, Mandrup S. Sárvári AK, et al. Cell Metab. 2021 Feb 2;33(2):437-453.e5. doi: 10.1016/j.cmet.2020.12.004. Epub 2020 Dec 29. Cell Metab. 2021. PMID: 33378646 Free article.

10

Isolation of nuclei from mouse white adipose tissues for single-nucleus genomics.

Van Hauwaert EL, Gammelmark E, Sárvári AK, Larsen L, Nielsen R, Madsen JGS, Mandrup S. Van Hauwaert EL, et al. STAR Protoc. 2021 Jun 17;2(3):100612. doi: 10.1016/j.xpro.2021.100612. eCollection 2021 Sep 17. STAR Protoc. 2021. PMID: 34189477 Free PMC article.

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