Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

96 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
ARID1A and TERT promoter mutations in dedifferentiated meningioma.
Abedalthagafi MS, Bi WL, Merrill PH, Gibson WJ, Rose MF, Du Z, Francis JM, Du R, Dunn IF, Ligon AH, Beroukhim R, Santagata S. Abedalthagafi MS, et al. Cancer Genet. 2015 Jun;208(6):345-50. doi: 10.1016/j.cancergen.2015.03.005. Epub 2015 Mar 18. Cancer Genet. 2015. PMID: 25963524 Free PMC article.
Clinicopathologic and genomic characterizations of brain metastases using a comprehensive genomic panel.
Barakeh DH, Alsolme E, Alqubaishi F, Almutairi A, Alhabeeb L, Al Abdulmohsen S, Almohsen SS, Alayed D, AlAnazi SR, AlZahrani M, Binowayn AM, AlOtaibi SS, Alkhureeb FA, Al Shakweer W, Al-Hindi H, Alassiri A, Robinson HA, Abedalthagafi M. Barakeh DH, et al. Front Med (Lausanne). 2022 Nov 24;9:947456. doi: 10.3389/fmed.2022.947456. eCollection 2022. Front Med (Lausanne). 2022. PMID: 36507516 Free PMC article.
Packaging and containerization of computational methods.
Alser M, Lawlor B, Abdill RJ, Waymost S, Ayyala R, Rajkumar N, LaPierre N, Brito J, Ribeiro-Dos-Santos AM, Almadhoun N, Sarwal V, Firtina C, Osinski T, Eskin E, Hu Q, Strong D, Kim BBD, Abedalthagafi MS, Mutlu O, Mangul S. Alser M, et al. Among authors: abedalthagafi ms. Nat Protoc. 2024 Sep;19(9):2529-2539. doi: 10.1038/s41596-024-00986-0. Epub 2024 Apr 2. Nat Protoc. 2024. PMID: 38565959 Review.
Analytical code sharing practices in biomedical research.
Sharma NK, Ayyala R, Deshpande D, Patel YM, Munteanu V, Ciorba D, Fiscutean A, Vahed M, Sarkar A, Guo R, Moore A, Darci-Maher N, Nogoy NA, Abedalthagafi MS, Mangul S. Sharma NK, et al. Among authors: abedalthagafi ms. bioRxiv [Preprint]. 2023 Aug 7:2023.07.31.551384. doi: 10.1101/2023.07.31.551384. bioRxiv. 2023. Update in: PeerJ Comput Sci. 2024 Jun 28;10:e2066. doi: 10.7717/peerj-cs.2066. PMID: 37609176 Free PMC article. Updated. Preprint.
Rigorous benchmarking of T-cell receptor repertoire profiling methods for cancer RNA sequencing.
Peng K, Nowicki TS, Campbell K, Vahed M, Peng D, Meng Y, Nagareddy A, Huang YN, Karlsberg A, Miller Z, Brito J, Nadel B, Pak VM, Abedalthagafi MS, Burkhardt AM, Alachkar H, Ribas A, Mangul S. Peng K, et al. Among authors: abedalthagafi ms. Brief Bioinform. 2023 Jul 20;24(4):bbad220. doi: 10.1093/bib/bbad220. Brief Bioinform. 2023. PMID: 37291798 Free PMC article.
Adjuvant radiation therapy, local recurrence, and the need for salvage therapy in atypical meningioma.
Aizer AA, Arvold ND, Catalano P, Claus EB, Golby AJ, Johnson MD, Al-Mefty O, Wen PY, Reardon DA, Lee EQ, Nayak L, Rinne ML, Beroukhim R, Weiss SE, Ramkissoon SH, Abedalthagafi M, Santagata S, Dunn IF, Alexander BM. Aizer AA, et al. Neuro Oncol. 2014 Nov;16(11):1547-53. doi: 10.1093/neuonc/nou098. Epub 2014 Jun 2. Neuro Oncol. 2014. PMID: 24891451 Free PMC article.
Isolated cerebral mucormycosis of the basal ganglia.
Malik AN, Bi WL, McCray B, Abedalthagafi M, Vaitkevicius H, Dunn IF. Malik AN, et al. Clin Neurol Neurosurg. 2014 Sep;124:102-5. doi: 10.1016/j.clineuro.2014.06.022. Epub 2014 Jun 23. Clin Neurol Neurosurg. 2014. PMID: 25019460 Free PMC article.
Clinical multiplexed exome sequencing distinguishes adult oligodendroglial neoplasms from astrocytic and mixed lineage gliomas.
Cryan JB, Haidar S, Ramkissoon LA, Bi WL, Knoff DS, Schultz N, Abedalthagafi M, Brown L, Wen PY, Reardon DA, Dunn IF, Folkerth RD, Santagata S, Lindeman NI, Ligon AH, Beroukhim R, Hornick JL, Alexander BM, Ligon KL, Ramkissoon SH. Cryan JB, et al. Oncotarget. 2014 Sep 30;5(18):8083-92. doi: 10.18632/oncotarget.2342. Oncotarget. 2014. PMID: 25257301 Free PMC article.
Angiomatous meningiomas have a distinct genetic profile with multiple chromosomal polysomies including polysomy of chromosome 5.
Abedalthagafi MS, Merrill PH, Bi WL, Jones RT, Listewnik ML, Ramkissoon SH, Thorner AR, Dunn IF, Beroukhim R, Alexander BM, Brastianos PK, Francis JM, Folkerth RD, Ligon KL, Van Hummelen P, Ligon AH, Santagata S. Abedalthagafi MS, et al. Oncotarget. 2014 Nov 15;5(21):10596-606. doi: 10.18632/oncotarget.2517. Oncotarget. 2014. PMID: 25347344 Free PMC article.
96 results