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Cell Specific eQTL Analysis without Sorting Cells.
Westra HJ, Arends D, Esko T, Peters MJ, Schurmann C, Schramm K, Kettunen J, Yaghootkar H, Fairfax BP, Andiappan AK, Li Y, Fu J, Karjalainen J, Platteel M, Visschedijk M, Weersma RK, Kasela S, Milani L, Tserel L, Peterson P, Reinmaa E, Hofman A, Uitterlinden AG, Rivadeneira F, Homuth G, Petersmann A, Lorbeer R, Prokisch H, Meitinger T, Herder C, Roden M, Grallert H, Ripatti S, Perola M, Wood AR, Melzer D, Ferrucci L, Singleton AB, Hernandez DG, Knight JC, Melchiotti R, Lee B, Poidinger M, Zolezzi F, Larbi A, Wang de Y, van den Berg LH, Veldink JH, Rotzschke O, Makino S, Salomaa V, Strauch K, Völker U, van Meurs JB, Metspalu A, Wijmenga C, Jansen RC, Franke L. Westra HJ, et al. Among authors: li y. PLoS Genet. 2015 May 8;11(5):e1005223. doi: 10.1371/journal.pgen.1005223. eCollection 2015 May. PLoS Genet. 2015. PMID: 25955312 Free PMC article.
Sequence polymorphisms cause many false cis eQTLs.
Alberts R, Terpstra P, Li Y, Breitling R, Nap JP, Jansen RC. Alberts R, et al. Among authors: li y. PLoS One. 2007 Jul 18;2(7):e622. doi: 10.1371/journal.pone.0000622. PLoS One. 2007. PMID: 17637838 Free PMC article.
Genetical genomics: spotlight on QTL hotspots.
Breitling R, Li Y, Tesson BM, Fu J, Wu C, Wiltshire T, Gerrits A, Bystrykh LV, de Haan G, Su AI, Jansen RC. Breitling R, et al. Among authors: li y. PLoS Genet. 2008 Oct;4(10):e1000232. doi: 10.1371/journal.pgen.1000232. Epub 2008 Oct 24. PLoS Genet. 2008. PMID: 18949031 Free PMC article. No abstract available.
WormQTL--public archive and analysis web portal for natural variation data in Caenorhabditis spp.
Snoek LB, Van der Velde KJ, Arends D, Li Y, Beyer A, Elvin M, Fisher J, Hajnal A, Hengartner MO, Poulin GB, Rodriguez M, Schmid T, Schrimpf S, Xue F, Jansen RC, Kammenga JE, Swertz MA. Snoek LB, et al. Among authors: li y. Nucleic Acids Res. 2013 Jan;41(Database issue):D738-43. doi: 10.1093/nar/gks1124. Epub 2012 Nov 24. Nucleic Acids Res. 2013. PMID: 23180786 Free PMC article.
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