Dondelinger F - Search Results

1

Corrigendum: A pan-cancer proteomic perspective on The Cancer Genome Atlas.

Akbani R, Ng PK, Werner HM, Shahmoradgoli M, Zhang F, Ju Z, Liu W, Yang JY, Yoshihara K, Li J, Ling S, Seviour EG, Ram PT, Minna JD, Diao L, Tong P, Heymach JV, Hill SM, Dondelinger F, Städler N, Byers LA, Meric-Bernstam F, Weinstein JN, Broom BM, Verhaak RG, Liang H, Mukherjee S, Lu Y, Mills GB. Akbani R, et al. Among authors: dondelinger f. Nat Commun. 2015 Jan 28;6:4852. doi: 10.1038/ncomms5852. Nat Commun. 2015. PMID: 25629879 Free article. No abstract available.

2

A pan-cancer proteomic perspective on The Cancer Genome Atlas.

Akbani R, Ng PK, Werner HM, Shahmoradgoli M, Zhang F, Ju Z, Liu W, Yang JY, Yoshihara K, Li J, Ling S, Seviour EG, Ram PT, Minna JD, Diao L, Tong P, Heymach JV, Hill SM, Dondelinger F, Städler N, Byers LA, Meric-Bernstam F, Weinstein JN, Broom BM, Verhaak RG, Liang H, Mukherjee S, Lu Y, Mills GB. Akbani R, et al. Among authors: dondelinger f. Nat Commun. 2014 May 29;5:3887. doi: 10.1038/ncomms4887. Nat Commun. 2014. PMID: 24871328 Free PMC article.

3

Molecular heterogeneity at the network level: high-dimensional testing, clustering and a TCGA case study.

Städler N, Dondelinger F, Hill SM, Akbani R, Lu Y, Mills GB, Mukherjee S. Städler N, et al. Among authors: dondelinger f. Bioinformatics. 2017 Sep 15;33(18):2890-2896. doi: 10.1093/bioinformatics/btx322. Bioinformatics. 2017. PMID: 28535188 Free PMC article.

4

Statistical Network Inference for Time-Varying Molecular Data with Dynamic Bayesian Networks.

Dondelinger F, Mukherjee S. Dondelinger F, et al. Methods Mol Biol. 2019;1883:25-48. doi: 10.1007/978-1-4939-8882-2_2. Methods Mol Biol. 2019. PMID: 30547395 Review.

5

The joint lasso: high-dimensional regression for group structured data.

Dondelinger F, Mukherjee S; Alzheimer’s Disease Neuroimaging Initiative. Dondelinger F, et al. Biostatistics. 2020 Apr 1;21(2):219-235. doi: 10.1093/biostatistics/kxy035. Biostatistics. 2020. PMID: 30192903 Free PMC article.

6

Causal network inference using biochemical kinetics.

Oates CJ, Dondelinger F, Bayani N, Korkola J, Gray JW, Mukherjee S. Oates CJ, et al. Among authors: dondelinger f. Bioinformatics. 2014 Sep 1;30(17):i468-74. doi: 10.1093/bioinformatics/btu452. Bioinformatics. 2014. PMID: 25161235 Free PMC article.

7

Nonhomogeneous dynamic Bayesian networks in systems biology.

Lèbre S, Dondelinger F, Husmeier D. Lèbre S, et al. Among authors: dondelinger f. Methods Mol Biol. 2012;802:199-213. doi: 10.1007/978-1-61779-400-1_13. Methods Mol Biol. 2012. PMID: 22130882

8

Reverse engineering gene regulatory networks related to quorum sensing in the plant pathogen Pectobacterium atrosepticum.

Lin K, Husmeier D, Dondelinger F, Mayer CD, Liu H, Prichard L, Salmond GP, Toth IK, Birch PR. Lin K, et al. Among authors: dondelinger f. Methods Mol Biol. 2010;673:253-81. doi: 10.1007/978-1-60761-842-3_17. Methods Mol Biol. 2010. PMID: 20835805

9

A hierarchical Bayesian approach for detecting global microbiome associations.

Hatami F, Beamish E, Davies A, Rigby R, Dondelinger F. Hatami F, et al. Among authors: dondelinger f. Stat Appl Genet Mol Biol. 2021 Nov 1;20(3):85-100. doi: 10.1515/sagmb-2021-0047. Stat Appl Genet Mol Biol. 2021. PMID: 34714989 Free PMC article.

10

A regularized functional regression model enabling transcriptome-wide dosage-dependent association study of cancer drug response.

Koukouli E, Wang D, Dondelinger F, Park J. Koukouli E, et al. Among authors: dondelinger f. PLoS Comput Biol. 2021 Jan 25;17(1):e1008066. doi: 10.1371/journal.pcbi.1008066. eCollection 2021 Jan. PLoS Comput Biol. 2021. PMID: 33493149 Free PMC article.

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