Hochreiter S - Search Results

1

Using transcriptomics to guide lead optimization in drug discovery projects: Lessons learned from the QSTAR project.

Verbist B, Klambauer G, Vervoort L, Talloen W; QSTAR Consortium; Shkedy Z, Thas O, Bender A, Göhlmann HW, Hochreiter S. Verbist B, et al. Among authors: hochreiter s. Drug Discov Today. 2015 May;20(5):505-13. doi: 10.1016/j.drudis.2014.12.014. Epub 2015 Jan 10. Drug Discov Today. 2015. PMID: 25582842 Free article.

2

I/NI-calls for the exclusion of non-informative genes: a highly effective filtering tool for microarray data.

Talloen W, Clevert DA, Hochreiter S, Amaratunga D, Bijnens L, Kass S, Göhlmann HW. Talloen W, et al. Among authors: hochreiter s. Bioinformatics. 2007 Nov 1;23(21):2897-902. doi: 10.1093/bioinformatics/btm478. Epub 2007 Oct 5. Bioinformatics. 2007. PMID: 17921172

3

Informative or noninformative calls for gene expression: a latent variable approach.

Kasim A, Lin D, Van Sanden S, Clevert DA, Bijnens L, Göhlmann H, Amaratunga D, Hochreiter S, Shkedy Z, Talloen W. Kasim A, et al. Among authors: hochreiter s. Stat Appl Genet Mol Biol. 2010;9:Article 4. doi: 10.2202/1544-6115.1460. Epub 2010 Jan 6. Stat Appl Genet Mol Biol. 2010. PMID: 20196754

4

FABIA: factor analysis for bicluster acquisition.

Hochreiter S, Bodenhofer U, Heusel M, Mayr A, Mitterecker A, Kasim A, Khamiakova T, Van Sanden S, Lin D, Talloen W, Bijnens L, Göhlmann HW, Shkedy Z, Clevert DA. Hochreiter S, et al. Bioinformatics. 2010 Jun 15;26(12):1520-7. doi: 10.1093/bioinformatics/btq227. Epub 2010 Apr 23. Bioinformatics. 2010. PMID: 20418340 Free PMC article.

5

Filtering data from high-throughput experiments based on measurement reliability.

Talloen W, Hochreiter S, Bijnens L, Kasim A, Shkedy Z, Amaratunga D, Göhlmann H. Talloen W, et al. Among authors: hochreiter s. Proc Natl Acad Sci U S A. 2010 Nov 16;107(46):E173-4; author reply E175. doi: 10.1073/pnas.1010604107. Epub 2010 Nov 8. Proc Natl Acad Sci U S A. 2010. PMID: 21059952 Free PMC article. No abstract available.

6

cn.FARMS: a latent variable model to detect copy number variations in microarray data with a low false discovery rate.

Clevert DA, Mitterecker A, Mayr A, Klambauer G, Tuefferd M, De Bondt A, Talloen W, Göhlmann H, Hochreiter S. Clevert DA, et al. Among authors: hochreiter s. Nucleic Acids Res. 2011 Jul;39(12):e79. doi: 10.1093/nar/gkr197. Epub 2011 Apr 12. Nucleic Acids Res. 2011. PMID: 21486749 Free PMC article.

7

cn.MOPS: mixture of Poissons for discovering copy number variations in next-generation sequencing data with a low false discovery rate.

Klambauer G, Schwarzbauer K, Mayr A, Clevert DA, Mitterecker A, Bodenhofer U, Hochreiter S. Klambauer G, et al. Among authors: hochreiter s. Nucleic Acids Res. 2012 May;40(9):e69. doi: 10.1093/nar/gks003. Epub 2012 Feb 1. Nucleic Acids Res. 2012. PMID: 22302147 Free PMC article.

8

DEXUS: identifying differential expression in RNA-Seq studies with unknown conditions.

Klambauer G, Unterthiner T, Hochreiter S. Klambauer G, et al. Among authors: hochreiter s. Nucleic Acids Res. 2013 Nov;41(21):e198. doi: 10.1093/nar/gkt834. Epub 2013 Sep 17. Nucleic Acids Res. 2013. PMID: 24049071 Free PMC article.

9

Rchemcpp: a web service for structural analoging in ChEMBL, Drugbank and the Connectivity Map.

Klambauer G, Wischenbart M, Mahr M, Unterthiner T, Mayr A, Hochreiter S. Klambauer G, et al. Among authors: hochreiter s. Bioinformatics. 2015 Oct 15;31(20):3392-4. doi: 10.1093/bioinformatics/btv373. Epub 2015 Jun 17. Bioinformatics. 2015. PMID: 26088801

10

Prediction of human population responses to toxic compounds by a collaborative competition.

Eduati F, Mangravite LM, Wang T, Tang H, Bare JC, Huang R, Norman T, Kellen M, Menden MP, Yang J, Zhan X, Zhong R, Xiao G, Xia M, Abdo N, Kosyk O; NIEHS-NCATS-UNC DREAM Toxicogenetics Collaboration; Friend S, Dearry A, Simeonov A, Tice RR, Rusyn I, Wright FA, Stolovitzky G, Xie Y, Saez-Rodriguez J. Eduati F, et al. Nat Biotechnol. 2015 Sep;33(9):933-40. doi: 10.1038/nbt.3299. Epub 2015 Aug 10. Nat Biotechnol. 2015. PMID: 26258538 Free PMC article.

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