Lua RC - Search Results

1

Prediction and redesign of protein-protein interactions.

Lua RC, Marciano DC, Katsonis P, Adikesavan AK, Wilkins AD, Lichtarge O. Lua RC, et al. Prog Biophys Mol Biol. 2014 Nov-Dec;116(2-3):194-202. doi: 10.1016/j.pbiomolbio.2014.05.004. Epub 2014 May 27. Prog Biophys Mol Biol. 2014. PMID: 24878423 Free PMC article. Review.

2

Evolutionary trace for prediction and redesign of protein functional sites.

Wilkins A, Erdin S, Lua R, Lichtarge O. Wilkins A, et al. Methods Mol Biol. 2012;819:29-42. doi: 10.1007/978-1-61779-465-0_3. Methods Mol Biol. 2012. PMID: 22183528 Free PMC article.

3

Accounting for epistatic interactions improves the functional analysis of protein structures.

Wilkins AD, Venner E, Marciano DC, Erdin S, Atri B, Lua RC, Lichtarge O. Wilkins AD, et al. Among authors: lua rc. Bioinformatics. 2013 Nov 1;29(21):2714-21. doi: 10.1093/bioinformatics/btt489. Epub 2013 Sep 10. Bioinformatics. 2013. PMID: 24021383 Free PMC article.

4

DISCOVERY OF FUNCTIONAL AND DISEASE PATHWAYS BY COMMUNITY DETECTION IN PROTEIN-PROTEIN INTERACTION NETWORKS.

Wilson SJ, Wilkins AD, Lin CH, Lua RC, Lichtarge O. Wilson SJ, et al. Among authors: lua rc. Pac Symp Biocomput. 2017;22:336-347. doi: 10.1142/9789813207813_0032. Pac Symp Biocomput. 2017. PMID: 27896987 Free PMC article.

5

Sequence and structure continuity of evolutionary importance improves protein functional site discovery and annotation.

Wilkins AD, Lua R, Erdin S, Ward RM, Lichtarge O. Wilkins AD, et al. Protein Sci. 2010 Jul;19(7):1296-311. doi: 10.1002/pro.406. Protein Sci. 2010. PMID: 20506260 Free PMC article.

6

Separation of recombination and SOS response in Escherichia coli RecA suggests LexA interaction sites.

Adikesavan AK, Katsonis P, Marciano DC, Lua R, Herman C, Lichtarge O. Adikesavan AK, et al. PLoS Genet. 2011 Sep;7(9):e1002244. doi: 10.1371/journal.pgen.1002244. Epub 2011 Sep 1. PLoS Genet. 2011. PMID: 21912525 Free PMC article.

7

PyETV: a PyMOL evolutionary trace viewer to analyze functional site predictions in protein complexes.

Lua RC, Lichtarge O. Lua RC, et al. Bioinformatics. 2010 Dec 1;26(23):2981-2. doi: 10.1093/bioinformatics/btq566. Epub 2010 Oct 6. Bioinformatics. 2010. PMID: 20929911 Free PMC article.

8

ETAscape: analyzing protein networks to predict enzymatic function and substrates in Cytoscape.

Bachman BJ, Venner E, Lua RC, Erdin S, Lichtarge O. Bachman BJ, et al. Among authors: lua rc. Bioinformatics. 2012 Aug 15;28(16):2186-8. doi: 10.1093/bioinformatics/bts331. Epub 2012 Jun 11. Bioinformatics. 2012. PMID: 22689386 Free PMC article.

9

Prediction and experimental validation of enzyme substrate specificity in protein structures.

Amin SR, Erdin S, Ward RM, Lua RC, Lichtarge O. Amin SR, et al. Among authors: lua rc. Proc Natl Acad Sci U S A. 2013 Nov 5;110(45):E4195-202. doi: 10.1073/pnas.1305162110. Epub 2013 Oct 21. Proc Natl Acad Sci U S A. 2013. PMID: 24145433 Free PMC article.

10

Negative feedback in genetic circuits confers evolutionary resilience and capacitance.

Marciano DC, Lua RC, Katsonis P, Amin SR, Herman C, Lichtarge O. Marciano DC, et al. Among authors: lua rc. Cell Rep. 2014 Jun 26;7(6):1789-95. doi: 10.1016/j.celrep.2014.05.018. Epub 2014 Jun 5. Cell Rep. 2014. PMID: 24910431 Free PMC article.

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