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Analysis of nanopore data using hidden Markov models.
Schreiber J, Karplus K. Schreiber J, et al. Among authors: karplus k. Bioinformatics. 2015 Jun 15;31(12):1897-903. doi: 10.1093/bioinformatics/btv046. Epub 2015 Feb 3. Bioinformatics. 2015. PMID: 25649617 Free PMC article.
Applying Undertaker to quality assessment.
Archie JG, Paluszewski M, Karplus K. Archie JG, et al. Among authors: karplus k. Proteins. 2009;77 Suppl 9(Suppl 9):191-5. doi: 10.1002/prot.22508. Proteins. 2009. PMID: 19639637 Free PMC article.
Complete genome sequence of Pyrobaculum oguniense.
Bernick DL, Karplus K, Lui LM, Coker JK, Murphy JN, Chan PP, Cozen AE, Lowe TM. Bernick DL, et al. Among authors: karplus k. Stand Genomic Sci. 2012 Jul 30;6(3):336-45. doi: 10.4056/sigs.2645906. Epub 2012 Jul 20. Stand Genomic Sci. 2012. PMID: 23407329 Free PMC article.
PREDICT-2ND: a tool for generalized protein local structure prediction.
Katzman S, Barrett C, Thiltgen G, Karchin R, Karplus K. Katzman S, et al. Among authors: karplus k. Bioinformatics. 2008 Nov 1;24(21):2453-9. doi: 10.1093/bioinformatics/btn438. Epub 2008 Aug 30. Bioinformatics. 2008. PMID: 18757875 Free PMC article.
43 results