Pradhan S - Search Results

1

DNMT1-interacting RNAs block gene-specific DNA methylation.

Di Ruscio A, Ebralidze AK, Benoukraf T, Amabile G, Goff LA, Terragni J, Figueroa ME, De Figueiredo Pontes LL, Alberich-Jorda M, Zhang P, Wu M, D'Alò F, Melnick A, Leone G, Ebralidze KK, Pradhan S, Rinn JL, Tenen DG. Di Ruscio A, et al. Among authors: pradhan s. Nature. 2013 Nov 21;503(7476):371-6. doi: 10.1038/nature12598. Epub 2013 Oct 9. Nature. 2013. PMID: 24107992 Free PMC article.

2

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.

Cokus SJ, Feng S, Zhang X, Chen Z, Merriman B, Haudenschild CD, Pradhan S, Nelson SF, Pellegrini M, Jacobsen SE. Cokus SJ, et al. Among authors: pradhan s. Nature. 2008 Mar 13;452(7184):215-9. doi: 10.1038/nature06745. Epub 2008 Feb 17. Nature. 2008. PMID: 18278030 Free PMC article.

3

A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability.

Estève PO, Chang Y, Samaranayake M, Upadhyay AK, Horton JR, Feehery GR, Cheng X, Pradhan S. Estève PO, et al. Among authors: pradhan s. Nat Struct Mol Biol. 2011 Jan;18(1):42-8. doi: 10.1038/nsmb.1939. Epub 2010 Dec 12. Nat Struct Mol Biol. 2011. PMID: 21151116 Free PMC article.

4

Biochemical characterization of recombinant β-glucosyltransferase and analysis of global 5-hydroxymethylcytosine in unique genomes.

Terragni J, Bitinaite J, Zheng Y, Pradhan S. Terragni J, et al. Among authors: pradhan s. Biochemistry. 2012 Feb 7;51(5):1009-19. doi: 10.1021/bi2014739. Epub 2012 Jan 27. Biochemistry. 2012. PMID: 22229759 Free PMC article.

5

Dual binding of chromomethylase domains to H3K9me2-containing nucleosomes directs DNA methylation in plants.

Du J, Zhong X, Bernatavichute YV, Stroud H, Feng S, Caro E, Vashisht AA, Terragni J, Chin HG, Tu A, Hetzel J, Wohlschlegel JA, Pradhan S, Patel DJ, Jacobsen SE. Du J, et al. Among authors: pradhan s. Cell. 2012 Sep 28;151(1):167-80. doi: 10.1016/j.cell.2012.07.034. Cell. 2012. PMID: 23021223 Free PMC article.

6

DNA methylation and differentiation: HOX genes in muscle cells.

Tsumagari K, Baribault C, Terragni J, Chandra S, Renshaw C, Sun Z, Song L, Crawford GE, Pradhan S, Lacey M, Ehrlich M. Tsumagari K, et al. Among authors: pradhan s. Epigenetics Chromatin. 2013 Aug 2;6(1):25. doi: 10.1186/1756-8935-6-25. Epigenetics Chromatin. 2013. PMID: 23916067 Free PMC article.

7

Methyllysine reader plant homeodomain (PHD) finger protein 20-like 1 (PHF20L1) antagonizes DNA (cytosine-5) methyltransferase 1 (DNMT1) proteasomal degradation.

Estève PO, Terragni J, Deepti K, Chin HG, Dai N, Espejo A, Corrêa IR Jr, Bedford MT, Pradhan S. Estève PO, et al. Among authors: pradhan s. J Biol Chem. 2014 Mar 21;289(12):8277-87. doi: 10.1074/jbc.M113.525279. Epub 2014 Feb 3. J Biol Chem. 2014. PMID: 24492612 Free PMC article.

8

Notch signaling genes: myogenic DNA hypomethylation and 5-hydroxymethylcytosine.

Terragni J, Zhang G, Sun Z, Pradhan S, Song L, Crawford GE, Lacey M, Ehrlich M. Terragni J, et al. Among authors: pradhan s. Epigenetics. 2014 Jun;9(6):842-50. doi: 10.4161/epi.28597. Epub 2014 Mar 26. Epigenetics. 2014. PMID: 24670287 Free PMC article.

9

Small RNA-mediated DNA (cytosine-5) methyltransferase 1 inhibition leads to aberrant DNA methylation.

Zhang G, Estève PO, Chin HG, Terragni J, Dai N, Corrêa IR Jr, Pradhan S. Zhang G, et al. Among authors: pradhan s. Nucleic Acids Res. 2015 Jul 13;43(12):6112-24. doi: 10.1093/nar/gkv518. Epub 2015 May 18. Nucleic Acids Res. 2015. PMID: 25990724 Free PMC article.

10

Whole genome DNA methylation: beyond genes silencing.

Tirado-Magallanes R, Rebbani K, Lim R, Pradhan S, Benoukraf T. Tirado-Magallanes R, et al. Among authors: pradhan s. Oncotarget. 2017 Jan 17;8(3):5629-5637. doi: 10.18632/oncotarget.13562. Oncotarget. 2017. PMID: 27895318 Free PMC article. Review.

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