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The long noncoding RNA SChLAP1 promotes aggressive prostate cancer and antagonizes the SWI/SNF complex.
Prensner JR, Iyer MK, Sahu A, Asangani IA, Cao Q, Patel L, Vergara IA, Davicioni E, Erho N, Ghadessi M, Jenkins RB, Triche TJ, Malik R, Bedenis R, McGregor N, Ma T, Chen W, Han S, Jing X, Cao X, Wang X, Chandler B, Yan W, Siddiqui J, Kunju LP, Dhanasekaran SM, Pienta KJ, Feng FY, Chinnaiyan AM. Prensner JR, et al. Among authors: iyer mk. Nat Genet. 2013 Nov;45(11):1392-8. doi: 10.1038/ng.2771. Epub 2013 Sep 29. Nat Genet. 2013. PMID: 24076601 Free PMC article.
Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.
Kim JH, Dhanasekaran SM, Prensner JR, Cao X, Robinson D, Kalyana-Sundaram S, Huang C, Shankar S, Jing X, Iyer M, Hu M, Sam L, Grasso C, Maher CA, Palanisamy N, Mehra R, Kominsky HD, Siddiqui J, Yu J, Qin ZS, Chinnaiyan AM. Kim JH, et al. Genome Res. 2011 Jul;21(7):1028-41. doi: 10.1101/gr.119347.110. Genome Res. 2011. PMID: 21724842 Free PMC article.
RNA-Seq unleashed.
Iyer MK, Chinnaiyan AM. Iyer MK, et al. Nat Biotechnol. 2011 Jul 11;29(7):599-600. doi: 10.1038/nbt.1915. Nat Biotechnol. 2011. PMID: 21747384 No abstract available.
Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression.
Prensner JR, Iyer MK, Balbin OA, Dhanasekaran SM, Cao Q, Brenner JC, Laxman B, Asangani IA, Grasso CS, Kominsky HD, Cao X, Jing X, Wang X, Siddiqui J, Wei JT, Robinson D, Iyer HK, Palanisamy N, Maher CA, Chinnaiyan AM. Prensner JR, et al. Among authors: iyer hk, iyer mk. Nat Biotechnol. 2011 Jul 31;29(8):742-9. doi: 10.1038/nbt.1914. Nat Biotechnol. 2011. PMID: 21804560 Free PMC article.
Functionally recurrent rearrangements of the MAST kinase and Notch gene families in breast cancer.
Robinson DR, Kalyana-Sundaram S, Wu YM, Shankar S, Cao X, Ateeq B, Asangani IA, Iyer M, Maher CA, Grasso CS, Lonigro RJ, Quist M, Siddiqui J, Mehra R, Jing X, Giordano TJ, Sabel MS, Kleer CG, Palanisamy N, Natrajan R, Lambros MB, Reis-Filho JS, Kumar-Sinha C, Chinnaiyan AM. Robinson DR, et al. Nat Med. 2011 Nov 20;17(12):1646-51. doi: 10.1038/nm.2580. Nat Med. 2011. PMID: 22101766 Free PMC article.
Personalized oncology through integrative high-throughput sequencing: a pilot study.
Roychowdhury S, Iyer MK, Robinson DR, Lonigro RJ, Wu YM, Cao X, Kalyana-Sundaram S, Sam L, Balbin OA, Quist MJ, Barrette T, Everett J, Siddiqui J, Kunju LP, Navone N, Araujo JC, Troncoso P, Logothetis CJ, Innis JW, Smith DC, Lao CD, Kim SY, Roberts JS, Gruber SB, Pienta KJ, Talpaz M, Chinnaiyan AM. Roychowdhury S, et al. Among authors: iyer mk. Sci Transl Med. 2011 Nov 30;3(111):111ra121. doi: 10.1126/scitranslmed.3003161. Sci Transl Med. 2011. PMID: 22133722 Free PMC article.
Insights into Chinese prostate cancer with RNA-seq.
Sahu A, Iyer MK, Chinnaiyan AM. Sahu A, et al. Among authors: iyer mk. Cell Res. 2012 May;22(5):786-8. doi: 10.1038/cr.2012.50. Epub 2012 Mar 27. Cell Res. 2012. PMID: 22453238 Free PMC article. No abstract available.
Expressed pseudogenes in the transcriptional landscape of human cancers.
Kalyana-Sundaram S, Kumar-Sinha C, Shankar S, Robinson DR, Wu YM, Cao X, Asangani IA, Kothari V, Prensner JR, Lonigro RJ, Iyer MK, Barrette T, Shanmugam A, Dhanasekaran SM, Palanisamy N, Chinnaiyan AM. Kalyana-Sundaram S, et al. Among authors: iyer mk. Cell. 2012 Jun 22;149(7):1622-34. doi: 10.1016/j.cell.2012.04.041. Cell. 2012. PMID: 22726445 Free PMC article.
43 results