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Page 1
The genome of the hydatid tapeworm Echinococcus granulosus.
Zheng H, Zhang W, Zhang L, Zhang Z, Li J, Lu G, Zhu Y, Wang Y, Huang Y, Liu J, Kang H, Chen J, Wang L, Chen A, Yu S, Gao Z, Jin L, Gu W, Wang Z, Zhao L, Shi B, Wen H, Lin R, Jones MK, Brejova B, Vinar T, Zhao G, McManus DP, Chen Z, Zhou Y, Wang S. Zheng H, et al. Among authors: vinar t. Nat Genet. 2013 Oct;45(10):1168-75. doi: 10.1038/ng.2757. Epub 2013 Sep 8. Nat Genet. 2013. PMID: 24013640
Optimal spaced seeds for homologous coding regions.
Brejová B, Brown DG, Vinar T. Brejová B, et al. Among authors: vinar t. J Bioinform Comput Biol. 2004 Jan;1(4):595-610. doi: 10.1142/s0219720004000326. J Bioinform Comput Biol. 2004. PMID: 15290755
ExonHunter: a comprehensive approach to gene finding.
Brejová B, Brown DG, Li M, Vinar T. Brejová B, et al. Among authors: vinar t. Bioinformatics. 2005 Jun;21 Suppl 1:i57-65. doi: 10.1093/bioinformatics/bti1040. Bioinformatics. 2005. PMID: 15961499
Homology search for genes.
Cui X, Vinar T, Brejová B, Shasha D, Li M. Cui X, et al. Among authors: vinar t. Bioinformatics. 2007 Jul 1;23(13):i97-103. doi: 10.1093/bioinformatics/btm225. Bioinformatics. 2007. PMID: 17646351
Comparative and demographic analysis of orang-utan genomes.
Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, Muzny DM, Yang SP, Wang Z, Chinwalla AT, Minx P, Mitreva M, Cook L, Delehaunty KD, Fronick C, Schmidt H, Fulton LA, Fulton RS, Nelson JO, Magrini V, Pohl C, Graves TA, Markovic C, Cree A, Dinh HH, Hume J, Kovar CL, Fowler GR, Lunter G, Meader S, Heger A, Ponting CP, Marques-Bonet T, Alkan C, Chen L, Cheng Z, Kidd JM, Eichler EE, White S, Searle S, Vilella AJ, Chen Y, Flicek P, Ma J, Raney B, Suh B, Burhans R, Herrero J, Haussler D, Faria R, Fernando O, Darré F, Farré D, Gazave E, Oliva M, Navarro A, Roberto R, Capozzi O, Archidiacono N, Della Valle G, Purgato S, Rocchi M, Konkel MK, Walker JA, Ullmer B, Batzer MA, Smit AF, Hubley R, Casola C, Schrider DR, Hahn MW, Quesada V, Puente XS, Ordoñez GR, López-Otín C, Vinar T, Brejova B, Ratan A, Harris RS, Miller W, Kosiol C, Lawson HA, Taliwal V, Martins AL, Siepel A, Roychoudhury A, Ma X, Degenhardt J, Bustamante CD, Gutenkunst RN, Mailund T, Dutheil JY, Hobolth A, Schierup MH, Ryder OA, Yoshinaga Y, de Jong PJ, Weinstock GM, Rogers J, Mardis ER, Gibbs RA, Wilson RK. Locke DP, et al. Among authors: vinar t. Nature. 2011 Jan 27;469(7331):529-33. doi: 10.1038/nature09687. Nature. 2011. PMID: 21270892 Free PMC article.
Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution.
Zhu S, Cao YZ, Jiang C, Tan BY, Wang Z, Feng S, Zhang L, Su XH, Brejova B, Vinar T, Xu M, Wang MX, Zhang SG, Huang MR, Wu R, Zhou Y. Zhu S, et al. Among authors: vinar t. BMC Genomics. 2012 Aug 9;13:382. doi: 10.1186/1471-2164-13-382. BMC Genomics. 2012. PMID: 22876864 Free PMC article.
Probabilistic approaches to alignment with tandem repeats.
Nánási M, Vinař T, Brejová B. Nánási M, et al. Among authors: vinar t. Algorithms Mol Biol. 2014 Mar 1;9(1):3. doi: 10.1186/1748-7188-9-3. Algorithms Mol Biol. 2014. PMID: 24580741 Free PMC article.
57 results