Barak M - Search Results

1

Automated analysis of immunoglobulin genes from high-throughput sequencing: life without a template.

Michaeli M, Barak M, Hazanov L, Noga H, Mehr R. Michaeli M, et al. Among authors: barak m. J Clin Bioinforma. 2013 Aug 27;3(1):15. doi: 10.1186/2043-9113-3-15. J Clin Bioinforma. 2013. PMID: 23977981 Free PMC article.

2

Factors important in evolutionary shaping of immunoglobulin gene loci.

Barak M, Eilat G, Unger R, Mehr R. Barak M, et al. Immunome Res. 2010 Dec 6;6:13. doi: 10.1186/1745-7580-6-13. Immunome Res. 2010. PMID: 21134249 Free PMC article.

3

Immunoglobulin variable-region gene mutational lineage tree analysis: application to autoimmune diseases.

Steiman-Shimony A, Edelman H, Barak M, Shahaf G, Dunn-Walters D, Stott DI, Abraham RS, Mehr R. Steiman-Shimony A, et al. Among authors: barak m. Autoimmun Rev. 2006 Apr;5(4):242-51. doi: 10.1016/j.autrev.2005.07.008. Epub 2005 Aug 24. Autoimmun Rev. 2006. PMID: 16697964 Free article. Review.

4

Lineage tree analysis of immunoglobulin variable-region gene mutations in autoimmune diseases: chronic activation, normal selection.

Steiman-Shimony A, Edelman H, Hutzler A, Barak M, Zuckerman NS, Shahaf G, Dunn-Walters D, Stott DI, Abraham RS, Mehr R. Steiman-Shimony A, et al. Among authors: barak m. Cell Immunol. 2006 Dec;244(2):130-6. doi: 10.1016/j.cellimm.2007.01.009. Epub 2007 Apr 16. Cell Immunol. 2006. PMID: 17434468

5

IgTree: creating Immunoglobulin variable region gene lineage trees.

Barak M, Zuckerman NS, Edelman H, Unger R, Mehr R. Barak M, et al. J Immunol Methods. 2008 Sep 30;338(1-2):67-74. doi: 10.1016/j.jim.2008.06.006. Epub 2008 Aug 14. J Immunol Methods. 2008. PMID: 18706908

6

Antigen-driven selection in germinal centers as reflected by the shape characteristics of immunoglobulin gene lineage trees: a large-scale simulation study.

Shahaf G, Barak M, Zuckerman NS, Swerdlin N, Gorfine M, Mehr R. Shahaf G, et al. Among authors: barak m. J Theor Biol. 2008 Nov 21;255(2):210-22. doi: 10.1016/j.jtbi.2008.08.005. Epub 2008 Aug 13. J Theor Biol. 2008. PMID: 18786548

7

Somatic hypermutation and antigen-driven selection of B cells are altered in autoimmune diseases.

Zuckerman NS, Hazanov H, Barak M, Edelman H, Hess S, Shcolnik H, Dunn-Walters D, Mehr R. Zuckerman NS, et al. Among authors: barak m. J Autoimmun. 2010 Dec;35(4):325-35. doi: 10.1016/j.jaut.2010.07.004. Epub 2010 Aug 19. J Autoimmun. 2010. PMID: 20727711

8

B-cell clonal diversification and gut-lymph node trafficking in ulcerative colitis revealed using lineage tree analysis.

Tabibian-Keissar H, Zuckerman NS, Barak M, Dunn-Walters DK, Steiman-Shimony A, Chowers Y, Ofek E, Rosenblatt K, Schiby G, Mehr R, Barshack I. Tabibian-Keissar H, et al. Among authors: barak m. Eur J Immunol. 2008 Sep;38(9):2600-9. doi: 10.1002/eji.200838333. Eur J Immunol. 2008. PMID: 18792412 Free article.

9

Evidence for large diversity in the human transcriptome created by Alu RNA editing.

Barak M, Levanon EY, Eisenberg E, Paz N, Rechavi G, Church GM, Mehr R. Barak M, et al. Nucleic Acids Res. 2009 Nov;37(20):6905-15. doi: 10.1093/nar/gkp729. Epub 2009 Sep 8. Nucleic Acids Res. 2009. PMID: 19740767 Free PMC article.

10

Ig gene diversification and selection in follicular lymphoma, diffuse large B cell lymphoma and primary central nervous system lymphoma revealed by lineage tree and mutation analyses.

Zuckerman NS, McCann KJ, Ottensmeier CH, Barak M, Shahaf G, Edelman H, Dunn-Walters D, Abraham RS, Stevenson FK, Mehr R. Zuckerman NS, et al. Among authors: barak m. Int Immunol. 2010 Nov;22(11):875-87. doi: 10.1093/intimm/dxq441. Epub 2010 Nov 8. Int Immunol. 2010. PMID: 21059768

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