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SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner.
Luo R, Wong T, Zhu J, Liu CM, Zhu X, Wu E, Lee LK, Lin H, Zhu W, Cheung DW, Ting HF, Yiu SM, Peng S, Yu C, Li Y, Li R, Lam TW. Luo R, et al. Among authors: lam tw. PLoS One. 2013 May 31;8(5):e65632. doi: 10.1371/journal.pone.0065632. Print 2013. PLoS One. 2013. PMID: 23741504 Free PMC article.
Filtering of ineffective siRNAs and improved siRNA design tool.
Yiu SM, Wong PW, Lam TW, Mui YC, Kung HF, Lin M, Cheung YT. Yiu SM, et al. Among authors: lam tw. Bioinformatics. 2005 Jan 15;21(2):144-51. doi: 10.1093/bioinformatics/bth498. Epub 2004 Aug 27. Bioinformatics. 2005. PMID: 15333460
The mutated subsequence problem and locating conserved genes.
Chan HL, Lam TW, Sung WK, Wong PW, Yiu SM, Fan X. Chan HL, et al. Among authors: lam tw. Bioinformatics. 2005 May 15;21(10):2271-8. doi: 10.1093/bioinformatics/bti371. Epub 2005 Mar 3. Bioinformatics. 2005. PMID: 15746277 Free article.
Compressed indexing and local alignment of DNA.
Lam TW, Sung WK, Tam SL, Wong CK, Yiu SM. Lam TW, et al. Bioinformatics. 2008 Mar 15;24(6):791-7. doi: 10.1093/bioinformatics/btn032. Epub 2008 Jan 28. Bioinformatics. 2008. PMID: 18227115
SOAP2: an improved ultrafast tool for short read alignment.
Li R, Yu C, Li Y, Lam TW, Yiu SM, Kristiansen K, Wang J. Li R, et al. Among authors: lam tw. Bioinformatics. 2009 Aug 1;25(15):1966-7. doi: 10.1093/bioinformatics/btp336. Epub 2009 Jun 3. Bioinformatics. 2009. PMID: 19497933
104 results