Juan D - Search Results

1

Subfunctionalization via adaptive evolution influenced by genomic context: the case of histone chaperones ASF1a and ASF1b.

Abascal F, Corpet A, Gurard-Levin ZA, Juan D, Ochsenbein F, Rico D, Valencia A, Almouzni G. Abascal F, et al. Among authors: juan d. Mol Biol Evol. 2013 Aug;30(8):1853-66. doi: 10.1093/molbev/mst086. Epub 2013 May 2. Mol Biol Evol. 2013. PMID: 23645555

2

A neural network approach to evaluate fold recognition results.

Juan D, Graña O, Pazos F, Fariselli P, Casadio R, Valencia A. Juan D, et al. Proteins. 2003 Mar 1;50(4):600-8. doi: 10.1002/prot.10322. Proteins. 2003. PMID: 12577266

3

Identification of amino acid residues crucial for chemokine receptor dimerization.

Hernanz-Falcón P, Rodríguez-Frade JM, Serrano A, Juan D, del Sol A, Soriano SF, Roncal F, Gómez L, Valencia A, Martínez-A C, Mellado M. Hernanz-Falcón P, et al. Among authors: juan d. Nat Immunol. 2004 Feb;5(2):216-23. doi: 10.1038/ni1027. Epub 2004 Jan 11. Nat Immunol. 2004. PMID: 14716309

4

Assessing protein co-evolution in the context of the tree of life assists in the prediction of the interactome.

Pazos F, Ranea JA, Juan D, Sternberg MJ. Pazos F, et al. Among authors: juan d. J Mol Biol. 2005 Sep 30;352(4):1002-15. doi: 10.1016/j.jmb.2005.07.005. J Mol Biol. 2005. PMID: 16139301

5

TSEMA: interactive prediction of protein pairings between interacting families.

Izarzugaza JM, Juan D, Pons C, Ranea JA, Valencia A, Pazos F. Izarzugaza JM, et al. Among authors: juan d. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W315-9. doi: 10.1093/nar/gkl112. Nucleic Acids Res. 2006. PMID: 16845017 Free PMC article.

6

High-confidence prediction of global interactomes based on genome-wide coevolutionary networks.

Juan D, Pazos F, Valencia A. Juan D, et al. Proc Natl Acad Sci U S A. 2008 Jan 22;105(3):934-9. doi: 10.1073/pnas.0709671105. Epub 2008 Jan 16. Proc Natl Acad Sci U S A. 2008. PMID: 18199838 Free PMC article.

7

Enhancing the prediction of protein pairings between interacting families using orthology information.

Izarzugaza JM, Juan D, Pons C, Pazos F, Valencia A. Izarzugaza JM, et al. Among authors: juan d. BMC Bioinformatics. 2008 Jan 23;9:35. doi: 10.1186/1471-2105-9-35. BMC Bioinformatics. 2008. PMID: 18215279 Free PMC article.

8

Co-evolution and co-adaptation in protein networks.

Juan D, Pazos F, Valencia A. Juan D, et al. FEBS Lett. 2008 Apr 9;582(8):1225-30. doi: 10.1016/j.febslet.2008.02.017. Epub 2008 Feb 20. FEBS Lett. 2008. PMID: 18282476 Free article. Review.

9

Prediction of protein interaction based on similarity of phylogenetic trees.

Pazos F, Juan D, Izarzugaza JM, Leon E, Valencia A. Pazos F, et al. Among authors: juan d. Methods Mol Biol. 2008;484:523-35. doi: 10.1007/978-1-59745-398-1_31. Methods Mol Biol. 2008. PMID: 18592199

10

EcID. A database for the inference of functional interactions in E. coli.

Andres Leon E, Ezkurdia I, García B, Valencia A, Juan D. Andres Leon E, et al. Among authors: juan d. Nucleic Acids Res. 2009 Jan;37(Database issue):D629-35. doi: 10.1093/nar/gkn853. Epub 2008 Nov 12. Nucleic Acids Res. 2009. PMID: 19004873 Free PMC article.

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