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Page 1
Controlled vocabularies and ontologies in proteomics: overview, principles and practice.
Mayer G, Jones AR, Binz PA, Deutsch EW, Orchard S, Montecchi-Palazzi L, Vizcaíno JA, Hermjakob H, Oveillero D, Julian R, Stephan C, Meyer HE, Eisenacher M. Mayer G, et al. Among authors: hermjakob h. Biochim Biophys Acta. 2014 Jan;1844(1 Pt A):98-107. doi: 10.1016/j.bbapap.2013.02.017. Epub 2013 Feb 19. Biochim Biophys Acta. 2014. PMID: 23429179 Free PMC article. Review.
The proteomics standards initiative.
Orchard S, Hermjakob H, Apweiler R. Orchard S, et al. Among authors: hermjakob h. Proteomics. 2003 Jul;3(7):1374-6. doi: 10.1002/pmic.200300496. Proteomics. 2003. PMID: 12872238
IntAct: an open source molecular interaction database.
Hermjakob H, Montecchi-Palazzi L, Lewington C, Mudali S, Kerrien S, Orchard S, Vingron M, Roechert B, Roepstorff P, Valencia A, Margalit H, Armstrong J, Bairoch A, Cesareni G, Sherman D, Apweiler R. Hermjakob H, et al. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D452-5. doi: 10.1093/nar/gkh052. Nucleic Acids Res. 2004. PMID: 14681455 Free PMC article.
The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data.
Hermjakob H, Montecchi-Palazzi L, Bader G, Wojcik J, Salwinski L, Ceol A, Moore S, Orchard S, Sarkans U, von Mering C, Roechert B, Poux S, Jung E, Mersch H, Kersey P, Lappe M, Li Y, Zeng R, Rana D, Nikolski M, Husi H, Brun C, Shanker K, Grant SG, Sander C, Bork P, Zhu W, Pandey A, Brazma A, Jacq B, Vidal M, Sherman D, Legrain P, Cesareni G, Xenarios I, Eisenberg D, Steipe B, Hogue C, Apweiler R. Hermjakob H, et al. Nat Biotechnol. 2004 Feb;22(2):177-83. doi: 10.1038/nbt926. Nat Biotechnol. 2004. PMID: 14755292
A common open representation of mass spectrometry data and its application to proteomics research.
Pedrioli PG, Eng JK, Hubley R, Vogelzang M, Deutsch EW, Raught B, Pratt B, Nilsson E, Angeletti RH, Apweiler R, Cheung K, Costello CE, Hermjakob H, Huang S, Julian RK, Kapp E, McComb ME, Oliver SG, Omenn G, Paton NW, Simpson R, Smith R, Taylor CF, Zhu W, Aebersold R. Pedrioli PG, et al. Among authors: hermjakob h. Nat Biotechnol. 2004 Nov;22(11):1459-66. doi: 10.1038/nbt1031. Nat Biotechnol. 2004. PMID: 15529173
Annotating the human proteome.
Orchard S, Hermjakob H, Apweiler R. Orchard S, et al. Among authors: hermjakob h. Mol Cell Proteomics. 2005 Apr;4(4):435-40. doi: 10.1074/mcp.R500003-MCP200. Epub 2005 Feb 2. Mol Cell Proteomics. 2005. PMID: 15691850 Free article. Review.
293 results