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Critical assessment of automated flow cytometry data analysis techniques.
Aghaeepour N, Finak G; FlowCAP Consortium; DREAM Consortium; Hoos H, Mosmann TR, Brinkman R, Gottardo R, Scheuermann RH. Aghaeepour N, et al. Among authors: brinkman r. Nat Methods. 2013 Mar;10(3):228-38. doi: 10.1038/nmeth.2365. Epub 2013 Feb 10. Nat Methods. 2013. PMID: 23396282 Free PMC article.
Data standards for flow cytometry.
Spidlen J, Gentleman RC, Haaland PD, Langille M, Le Meur N, Ochs MF, Schmitt C, Smith CA, Treister AS, Brinkman RR. Spidlen J, et al. Among authors: brinkman rr. OMICS. 2006 Summer;10(2):209-14. doi: 10.1089/omi.2006.10.209. OMICS. 2006. PMID: 16901228 Free PMC article. Review.
MIFlowCyt: the minimum information about a Flow Cytometry Experiment.
Lee JA, Spidlen J, Boyce K, Cai J, Crosbie N, Dalphin M, Furlong J, Gasparetto M, Goldberg M, Goralczyk EM, Hyun B, Jansen K, Kollmann T, Kong M, Leif R, McWeeney S, Moloshok TD, Moore W, Nolan G, Nolan J, Nikolich-Zugich J, Parrish D, Purcell B, Qian Y, Selvaraj B, Smith C, Tchuvatkina O, Wertheimer A, Wilkinson P, Wilson C, Wood J, Zigon R; International Society for Advancement of Cytometry Data Standards Task Force; Scheuermann RH, Brinkman RR. Lee JA, et al. Among authors: brinkman rr. Cytometry A. 2008 Oct;73(10):926-30. doi: 10.1002/cyto.a.20623. Cytometry A. 2008. PMID: 18752282 Free PMC article.
Gating-ML: XML-based gating descriptions in flow cytometry.
Spidlen J, Leif RC, Moore W, Roederer M; International Society for the Advancement of Cytometry Data Standards Task Force; Brinkman RR. Spidlen J, et al. Among authors: brinkman rr. Cytometry A. 2008 Dec;73A(12):1151-7. doi: 10.1002/cyto.a.20637. Cytometry A. 2008. PMID: 18773465 Free PMC article.
flowCore: a Bioconductor package for high throughput flow cytometry.
Hahne F, LeMeur N, Brinkman RR, Ellis B, Haaland P, Sarkar D, Spidlen J, Strain E, Gentleman R. Hahne F, et al. Among authors: brinkman rr. BMC Bioinformatics. 2009 Apr 9;10:106. doi: 10.1186/1471-2105-10-106. BMC Bioinformatics. 2009. PMID: 19358741 Free PMC article.
190 results